Gene Bphyt_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3706 
Symbol 
ID6281649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4150221 
End bp4151483 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content58% 
IMG OID642623295 
Productprotein of unknown function DUF1504 
Protein accessionYP_001897320 
Protein GI187925678 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.205112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00205013 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCATT CTGTAGAAAT TTCTGCCGCC ATCATCTTTG CCTTTGCGCT CATTCATACG 
TTCGCCGTAG CGCGCATTGA AAAGCTCTCC CACCGTTTTC CGCGGCATGC GGGTGTTTTC
CACTTCCTCG CGGAGGTGGA GGTCGTCTTC GGATTCTGGG CGCTGATTCT GTGTCTCGTG
ATGTGGGCGC TCGTCGGGTC ACATGTGACC ATCGAGTACC TGGAGCATCG CGAGTTTACG
GAGGCGCTGT TCGTCTTTGT CATTATGGTG GTCGCCGCGA GTCGACCTAT TCTCGTACTG
GTGACGACCA TTGTGATGCG GCTTGCGCGG TTTCTGCCGG TGCGCACCCA GGTTGCCGTT
ATCTGGTTCT CTCTGTCCGC AGTTCCCCTC CTGGGCTCCA TCATCACTGA ACCTGCGGCG
ATGACACTCG CCGCGCTATT GCTGCGCGAC ACGCTGTTCT CCGCGCGAAG TTCCGAGCGG
GTGAAGTATT TTGGCCTGGC GTTGCTTTTC GTGAATGTGT CCATCGGTGG GGTCATGACG
GCGTATGCAG CACCGCCGGT GTTGATGGTC GCGAGTGCCT GGGGGTGGAG CACCGGATTT
ATGGCGGCCA CCTTCGGATG GAAAGCAGCG CTCGCAGTTG TTTTCAATGC TACGGCTTTC
GTCGCCCTGA TTGCCAGGAG CGTGCCGACG TCCCAAGGGA GCGAGGGTGG TACAACCTCA
CCGTCCCAAC GCGTTCCGGT TGGCGTCACG CTAGTCCATC TCGGGTTTCT CGCGCTTGTC
GTCATCAACT CGCACCACGC TGTCGTGTTC ATCGGGGCAT TCCTCTTCTT CCTGGGCTAC
ACGCACGCTT ACGAGCGCCA CCAGTCGCCT CTCATGCTGC GCGAAAGCCT TCTGGTCGCT
TTCTTCCTTG GTGGGCTGGT TGTGCTCGGT GGCCTACAGC AATGGTGGCT TCAGCCGATA
GTGCGTTCCA TGGATGCGTT GACACTGTAT TTCGGCGCGA CAGGTCTGAC GGCAGTTATG
GACAACGCTG CCATCACCTA TCTCGGGTCG CTCATACCTG GCTTATCAGA CAGCGCAAAG
TACCTGCTCG TGGCGGGAGC GGTGACGGGC GGAGGATTGA CGGTGATTGC AAATGCTCCG
AACCCGGCCG GCCTCGCGAT ACTTGGAAAT CGGTTTTCAG GAGGCGCAGT CAGTCCGATA
AAACTGCTCG GCGCCGCGCT CATGCCTACC ATAATCGCAG GTCTAGCCTT TCTGGTTTTA
TAG
 
Protein sequence
MPHSVEISAA IIFAFALIHT FAVARIEKLS HRFPRHAGVF HFLAEVEVVF GFWALILCLV 
MWALVGSHVT IEYLEHREFT EALFVFVIMV VAASRPILVL VTTIVMRLAR FLPVRTQVAV
IWFSLSAVPL LGSIITEPAA MTLAALLLRD TLFSARSSER VKYFGLALLF VNVSIGGVMT
AYAAPPVLMV ASAWGWSTGF MAATFGWKAA LAVVFNATAF VALIARSVPT SQGSEGGTTS
PSQRVPVGVT LVHLGFLALV VINSHHAVVF IGAFLFFLGY THAYERHQSP LMLRESLLVA
FFLGGLVVLG GLQQWWLQPI VRSMDALTLY FGATGLTAVM DNAAITYLGS LIPGLSDSAK
YLLVAGAVTG GGLTVIANAP NPAGLAILGN RFSGGAVSPI KLLGAALMPT IIAGLAFLVL