| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3705 |
|---|
| Symbol | |
|---|
| ID | 6281010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4148351 |
|---|
| End bp | 4150105 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642623294 |
|---|
| Product | arsenite-activated ATPase ArsA |
|---|
| Protein accession | YP_001897319 |
|---|
| Protein GI | 187925677 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0003] Oxyanion-translocating ATPase |
|---|
| TIGRFAM ID | [TIGR00345] arsenite-activated ATPase (arsA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.430131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.00279853 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACACTCC CTCTCGTTAC AACTCGCCAT CTCTTTTTCA CCGGCAAGGG CGGCGTCGGG
AAGACGTCGC TCGCCTGTGC TACAGCGCTG CAGCTGGCTG AAAAGGGTAA GACCGTGCTG
CTGGTCAGCA CCGACCCAGC GTCCAATCTC GATGAGGTGC TCGAGACTCA ACTGTCCGGG
CAGCCAACGC CAGTCGCGCA GGTTCCAAAC CTCCACGCGC TGAACATCGA CCCCGAACTC
GCGGCGGCGG CCTACCGCGA GCGTACGGTC AGCCCTTATC GAGGCGTGTT ACCCGATGCG
GCAATTCGCA GCATGGAGGA ACAGTTTTCC GGTGGCTGCA CCGTCGAGAT AGCGGCGTTC
GACGCCTTTG CAGACTTGCT GGGCGGCAGT GCCACAGCGA ATGCGTACGA CCACATCATT
TTCGACACCG CACCCACGGG GCACACGTTG CGTTTGCTGA CACTGCCGTC GGCTTGGAGC
AACTTTCTGT CGACGAACAC GACCGGCAAT TCCTGCCTGG GCCCTCTGGC AGGCCTTGAG
CAAAACAGGC AGCTGTATGC AGCGGCCGTT GCCGAACTGA CCAATCACGA CCGCACCACT
GTGGTCCTGG TGACCCGGCC CGAGGCATCG GCATTCCGTG AGGCGGAGCG CACCCGTATC
GAACTGGCCG ACCTCGGGGT TCGAAACCTG GTGCTCGCAG TCAACGGAGT TTTCAAGGCT
GTCTCTTCTG ACGATGCCAT TGCTCGCGCG ATGGAAGAAC AGCAGGCTGT ATCTATCAAG
ACAATGCCGC CGGGTCTCGC AGCCCTTCCG CGAAGCGAAA CAGGCTTCAT TCCCAGGGGA
TTGGTCGGGC TGACCGCGTT AAAGGCGTAT TTGCACCCGG AGCAGATTGC AGCGCCCAGG
ACAGATGTCC GGTTGAGCGT GGAGTTGCCC GGCGGCCTCT TGCCGCTCGT TGACGACCTT
GAGAAGGCGG GCCATGGCCT TGTCATGACA ATGGGCAAGG GTGGCGTCGG CAAGACGACG
GTTGCTGCGG CGATAGCACT TGACTTGGCG CAGCGCGGAC ACGCAGTCCT GCTTTCGACC
ACTGACCCAG CTGCACATGT GGCGTGGACT CTCCAGGAAT CGCTGCCGGG TCTAACCGTG
AGTCGCATCG ACGCGGAACA GGAAGTGAAC CGCTATCGCG ATGAAGTTCT TGCCAAGGCC
GGTGCCCATC TCGACGCCCA AGGGAAGGCG ATGTTGGAGG AGGACCTGCG GTCGCCGTGC
ACCGAGGAGA TAGCGGTTTT TCGTGCTTTC GCGCGAACGG TGGATGAGGC CCGGGACTCG
TTCGTGATAC TGGACACGGC TCCGACCGGA CACACCATTC TGCTGATGGA CTCAGCGGAG
GCCTACCATC GCGAAGTCAC GCGCACGCAG GGTGATATGC CAGAAGCGGT TCGCCAACTA
TTGCCACGTC TGCGCGACCC CGATTTCACG CGTGTACTTA TCGTGACGCT CGCCGAGGCA
ACACCTGTTC ATGAGGCCGA GCGACTACAA GCCGACCTCC GGCGGGCCCA GATTGAACCG
TATGCCTGGG TCATTGACCA AAGTCTGCTC GCAAGCGGCA CCCACGACCC GGCACTTGCC
GAACGAGGGC GCTACGAGGT GCCATTTATC GAGCGCGTAA TGAAGCAGGA TGCGAAGCGG
GCTGTGTTGC TGCCGTGGCA GGCGCACGCG CCCGTTGGTC TACATGGGCT GGAAGAGTTG
GCTCGCGGGC ATTGA
|
|---|
| Protein sequence | MTLPLVTTRH LFFTGKGGVG KTSLACATAL QLAEKGKTVL LVSTDPASNL DEVLETQLSG
QPTPVAQVPN LHALNIDPEL AAAAYRERTV SPYRGVLPDA AIRSMEEQFS GGCTVEIAAF
DAFADLLGGS ATANAYDHII FDTAPTGHTL RLLTLPSAWS NFLSTNTTGN SCLGPLAGLE
QNRQLYAAAV AELTNHDRTT VVLVTRPEAS AFREAERTRI ELADLGVRNL VLAVNGVFKA
VSSDDAIARA MEEQQAVSIK TMPPGLAALP RSETGFIPRG LVGLTALKAY LHPEQIAAPR
TDVRLSVELP GGLLPLVDDL EKAGHGLVMT MGKGGVGKTT VAAAIALDLA QRGHAVLLST
TDPAAHVAWT LQESLPGLTV SRIDAEQEVN RYRDEVLAKA GAHLDAQGKA MLEEDLRSPC
TEEIAVFRAF ARTVDEARDS FVILDTAPTG HTILLMDSAE AYHREVTRTQ GDMPEAVRQL
LPRLRDPDFT RVLIVTLAEA TPVHEAERLQ ADLRRAQIEP YAWVIDQSLL ASGTHDPALA
ERGRYEVPFI ERVMKQDAKR AVLLPWQAHA PVGLHGLEEL ARGH
|
|---|
| |