Gene Bphyt_3703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3703 
Symbol 
ID6281008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4146190 
End bp4147500 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content61% 
IMG OID642623292 
ProductChloride channel core 
Protein accessionYP_001897317 
Protein GI187925675 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.474043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000487156 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACACC TGAAGTCTAT TGAGCAGTTC GCGATGGTTC CGTACCTCGC GCGCTGGCTG 
CTGCTCTCGT GCATTCTGGG TGCACTGGCG GGTAGCGCAT CCGCCTTGTT CCTCTATGCG
CTTGACAGCG CGACCGACGT TCGTGTTGGC CACGCCTGGC TGCTGTGGCT TTTGCCCATT
GCTGGCTTTG CGACCGGCTG GGTCTATCAC CGCGTCGGCA AGCCAGTAGA GGGCGGGAAC
AACCTGCTGA TTGACGAAAT CCACGACCCT CAAAAAATCG TGCCTAAGCG CATGGCGCCG
CTCGTACTCA TCGCCACCGT AGTCACGCAT CTGTTCGGCG GCTCGGCCGG GCGGGAGGGA
ACGGCCGTTC AGATGGGCGG GGCGCTGGCA GACCAGGTAA CGAAACTCTT TGGCCTCGAA
CGGGAAGACC GCCGCATCCT GCTAATGGGT GGAATCGCAG CGGGCTTCTC ATCGGTGTTT
GGCACCCCGC TGGCAGGGGC GATATTCGGA CTGGAAGTGC TGTCAATCGG GCGCCTGCGC
TACGACGCGC TGTTGACCTG CGTCGCGTCG TCACTGGTTG CAAACCAAGT CTGTCGCGTC
TGGGGGATTC ATCACACGGT CTACACGATT CCGTTCGTTC CGCACGTCTC GCCGCTCGGA
CTGGGCTCCG TTATTCTTGC GGGCATTGCG TTCGGTGTCG TCGGTATGCT GTTTGCCGAT
TCGACCCACG CGCTGTCGGC GTTCATCAAG CGACAGATTG CTTACGCACC GGCGCGTCCG
TTCGTAGGTG GACTCGTTGT AGCGCTAGCC GCGACCGTGC TTAATGTACC GCAATACCTT
GGCCTGGGTA TTCCGACTAT CGTTGAATCG TTCAACCAGT CTTTGCCTGT CTATGACTTT
GCGGGCAAAT TCGGTTTTAC CGTAGTTACG CTCGCTTCGG GCTTCAAGGG CGGCGAAGTC
ACGCCGCTGT TCTATATCGG AGCCACACTC GGGAATGCGC TGGGGCACGT GCTGGCGTTG
CCGATGCCAG TCCTCGCCGG CTTGGGTTTC GTCGCCGTAT TCGCCGGCGC CGCTAATACA
CCTATTGCTT CGACTGTCAT GGCAATCGAG CTGTTTGGCG CAGACATCGG CATGTATGCG
GCGCTGGCCT GCGTCGTGGC TTATCTGTTT TCCGGCCACA CAGGTATCTA CCGTGCCCAA
CGCGTCGGCC ATGCGAAACA TCCGCTACTG CCCTCGGGGA TGCGACTTTC GGACATCCCC
GCGATACGCC GTGCCGGACG GCCGGACTCC GCCACCGTAA CCCGCCCCTG A
 
Protein sequence
MKHLKSIEQF AMVPYLARWL LLSCILGALA GSASALFLYA LDSATDVRVG HAWLLWLLPI 
AGFATGWVYH RVGKPVEGGN NLLIDEIHDP QKIVPKRMAP LVLIATVVTH LFGGSAGREG
TAVQMGGALA DQVTKLFGLE REDRRILLMG GIAAGFSSVF GTPLAGAIFG LEVLSIGRLR
YDALLTCVAS SLVANQVCRV WGIHHTVYTI PFVPHVSPLG LGSVILAGIA FGVVGMLFAD
STHALSAFIK RQIAYAPARP FVGGLVVALA ATVLNVPQYL GLGIPTIVES FNQSLPVYDF
AGKFGFTVVT LASGFKGGEV TPLFYIGATL GNALGHVLAL PMPVLAGLGF VAVFAGAANT
PIASTVMAIE LFGADIGMYA ALACVVAYLF SGHTGIYRAQ RVGHAKHPLL PSGMRLSDIP
AIRRAGRPDS ATVTRP