Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3703 |
Symbol | |
ID | 6281008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4146190 |
End bp | 4147500 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623292 |
Product | Chloride channel core |
Protein accession | YP_001897317 |
Protein GI | 187925675 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.474043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000487156 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACACC TGAAGTCTAT TGAGCAGTTC GCGATGGTTC CGTACCTCGC GCGCTGGCTG CTGCTCTCGT GCATTCTGGG TGCACTGGCG GGTAGCGCAT CCGCCTTGTT CCTCTATGCG CTTGACAGCG CGACCGACGT TCGTGTTGGC CACGCCTGGC TGCTGTGGCT TTTGCCCATT GCTGGCTTTG CGACCGGCTG GGTCTATCAC CGCGTCGGCA AGCCAGTAGA GGGCGGGAAC AACCTGCTGA TTGACGAAAT CCACGACCCT CAAAAAATCG TGCCTAAGCG CATGGCGCCG CTCGTACTCA TCGCCACCGT AGTCACGCAT CTGTTCGGCG GCTCGGCCGG GCGGGAGGGA ACGGCCGTTC AGATGGGCGG GGCGCTGGCA GACCAGGTAA CGAAACTCTT TGGCCTCGAA CGGGAAGACC GCCGCATCCT GCTAATGGGT GGAATCGCAG CGGGCTTCTC ATCGGTGTTT GGCACCCCGC TGGCAGGGGC GATATTCGGA CTGGAAGTGC TGTCAATCGG GCGCCTGCGC TACGACGCGC TGTTGACCTG CGTCGCGTCG TCACTGGTTG CAAACCAAGT CTGTCGCGTC TGGGGGATTC ATCACACGGT CTACACGATT CCGTTCGTTC CGCACGTCTC GCCGCTCGGA CTGGGCTCCG TTATTCTTGC GGGCATTGCG TTCGGTGTCG TCGGTATGCT GTTTGCCGAT TCGACCCACG CGCTGTCGGC GTTCATCAAG CGACAGATTG CTTACGCACC GGCGCGTCCG TTCGTAGGTG GACTCGTTGT AGCGCTAGCC GCGACCGTGC TTAATGTACC GCAATACCTT GGCCTGGGTA TTCCGACTAT CGTTGAATCG TTCAACCAGT CTTTGCCTGT CTATGACTTT GCGGGCAAAT TCGGTTTTAC CGTAGTTACG CTCGCTTCGG GCTTCAAGGG CGGCGAAGTC ACGCCGCTGT TCTATATCGG AGCCACACTC GGGAATGCGC TGGGGCACGT GCTGGCGTTG CCGATGCCAG TCCTCGCCGG CTTGGGTTTC GTCGCCGTAT TCGCCGGCGC CGCTAATACA CCTATTGCTT CGACTGTCAT GGCAATCGAG CTGTTTGGCG CAGACATCGG CATGTATGCG GCGCTGGCCT GCGTCGTGGC TTATCTGTTT TCCGGCCACA CAGGTATCTA CCGTGCCCAA CGCGTCGGCC ATGCGAAACA TCCGCTACTG CCCTCGGGGA TGCGACTTTC GGACATCCCC GCGATACGCC GTGCCGGACG GCCGGACTCC GCCACCGTAA CCCGCCCCTG A
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Protein sequence | MKHLKSIEQF AMVPYLARWL LLSCILGALA GSASALFLYA LDSATDVRVG HAWLLWLLPI AGFATGWVYH RVGKPVEGGN NLLIDEIHDP QKIVPKRMAP LVLIATVVTH LFGGSAGREG TAVQMGGALA DQVTKLFGLE REDRRILLMG GIAAGFSSVF GTPLAGAIFG LEVLSIGRLR YDALLTCVAS SLVANQVCRV WGIHHTVYTI PFVPHVSPLG LGSVILAGIA FGVVGMLFAD STHALSAFIK RQIAYAPARP FVGGLVVALA ATVLNVPQYL GLGIPTIVES FNQSLPVYDF AGKFGFTVVT LASGFKGGEV TPLFYIGATL GNALGHVLAL PMPVLAGLGF VAVFAGAANT PIASTVMAIE LFGADIGMYA ALACVVAYLF SGHTGIYRAQ RVGHAKHPLL PSGMRLSDIP AIRRAGRPDS ATVTRP
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