| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3701 |
|---|
| Symbol | |
|---|
| ID | 6281006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4145010 |
|---|
| End bp | 4145678 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642623290 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001897315 |
|---|
| Protein GI | 187925673 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.000380934 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCAA ATCCAATGCA AAGAAGACCG CCGGTCGGTG TTATCCACCA GATTCCACGC
AGCGTGTGGA TTCTCGGTTA CGTCAGTCTT TTCATGGACG TCTCGTCCGA AATAGTTCAT
AGCGTTCTGC CCATGTTTCT GCTGGCAAGC CTTGGCGCCA GTGCTGGCAC AATAGGTCTC
ATCGAAGGCA TTGCTGAGGC CACGGCCCCA ATCGTCAAGG TATTCTCAGG AACGCTGAGT
GATTACCTGG ACAACCGAAA GTGGCTGGCT GTGGCCGGCT ATTCGCTCGG CGCAATCAGC
AAGCCGCTGT TTGCGGTTGC TCCAACCATT GGAATCGTGG TGGCCGCTCG CGTCATCGAC
CGGGTCGGCA AGGGTATTCG AGGCGCGCCT CGCGACGCGC TTGTCGCGGA CGTGACTCCG
CACCATCTGC GCGGTGCTGC ATTCGGACTT CGTCAGTCGC TTGATACGGT GGGTGCGTTC
CTGGAACCGC TAGTGGCCGT CGTCATCATG CTGGTGTGGG CAGATAACGG TGCAAAACGA
GTCTTCTCAC GCTTATCGGA ATTGCTTGTT CAATGCGTTT TCAGACAAGA CCGAGTTGCT
AGAAACCATG GGGTTAGCAC ATTTGACTCC AGGATTCGTG CACGGCAGTT GCGACGAGGC
TCGTTTTGA
|
|---|
| Protein sequence | MSPNPMQRRP PVGVIHQIPR SVWILGYVSL FMDVSSEIVH SVLPMFLLAS LGASAGTIGL
IEGIAEATAP IVKVFSGTLS DYLDNRKWLA VAGYSLGAIS KPLFAVAPTI GIVVAARVID
RVGKGIRGAP RDALVADVTP HHLRGAAFGL RQSLDTVGAF LEPLVAVVIM LVWADNGAKR
VFSRLSELLV QCVFRQDRVA RNHGVSTFDS RIRARQLRRG SF
|
|---|
| |