| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3689 |
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| Symbol | |
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| ID | 6282387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4134513 |
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| End bp | 4135265 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623278 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_001897303 |
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| Protein GI | 187925661 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000176782 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000718636 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGAAA AAGACTGGAT CGCCGGCGCT GCGAAAGCGC TGGCGATCAT CGAAGCATTC
GACGAAGAGC ACGCGCGCAT GACGCCGACC ACGGTGGCCG GCCGTGCGGG TCTATCCCGC
ACGGCGGCGC GCCGTTATTT GCTGACGCTG CGCGAACTCG GCTACGTGGA TACCGATGGC
AAGCTGTTCT GGCTCGCGCC GCGTGTTTTG CGGCTCGGGC AGTCGTATCT GGATTCGGCG
CGCTTGCCGC GCACCGTGCA GCCGTTCCTC CAACGCATCA CCGCGACCGT GCAGGAAACC
GCGCTGGTCG CGATCCTCGA CGAACACGAC GTGGTGTACG TTGCGCGCAA CGGCGTGAAC
CGGGCGATGG CGGTGGGTTT CGTGCTCGGT TCGCGCGCGC CGGCGCCGTT GTCGTCGGCG
GGACTGGTTC TGCTGGCGTT CCAGGCGCCG GAAGGCATCG AGCAGTGGCT GGCGTCTTAT
CCGATCAAGG TGTTCACGCC GCACACCTAT TCGACGATCG ACCAGTTGCG CGACGTGCTC
GGCGAAATTC GCCGCAATGG CTACGTGGTC ACCGACCAGC AACTGGAGCT GGGCGTGCGC
GGCGTCGCGG TGCCGTTGCG CGACCGGCAT GGTTCGGTCG TGGCGGCAAT CAGTGTCAGC
ATGCCGATCG GACAGGAGTC GGCCAATGCC GCGCTACACC GCGTGCTGCC GACCCTTTTG
GAGAACGCCA GCCTGCTGCG CAACCTCGTT TGA
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| Protein sequence | MDEKDWIAGA AKALAIIEAF DEEHARMTPT TVAGRAGLSR TAARRYLLTL RELGYVDTDG
KLFWLAPRVL RLGQSYLDSA RLPRTVQPFL QRITATVQET ALVAILDEHD VVYVARNGVN
RAMAVGFVLG SRAPAPLSSA GLVLLAFQAP EGIEQWLASY PIKVFTPHTY STIDQLRDVL
GEIRRNGYVV TDQQLELGVR GVAVPLRDRH GSVVAAISVS MPIGQESANA ALHRVLPTLL
ENASLLRNLV
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