| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3669 |
|---|
| Symbol | |
|---|
| ID | 6283537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4111022 |
|---|
| End bp | 4111690 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642623258 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001897283 |
|---|
| Protein GI | 187925641 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00406711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000686712 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTGA CTACACCCCG CGCCGCTGAG CCGATCGTCG CGCACGATCG CTTGATGCAG
CCAGCCGGTC GTGCGCCTGC TCTGGTCCGC GAGCTCACTG AAGTCGACCG CGAACGCCTG
CTGACCCACT TCCTGGCGCT CGACGAAGAC GACCGGCTCC TGCGCTTCGG CCAGATCGTG
CCGGACCACG TCATCGAAAA CTATGTTCGC GCGATCGACT TCAAACGCGA CACCGTCTTC
GGCGTCTTCA ACAACCAATT GCAGTTGACC GGCGTTGGCC ACCTGGCGTA CCTGCCGGCC
GAAGGCGACA AGCGTACGGC CGAGTTCGGC GTGTCCGTGC TGGAAAGCGT CCGCGGCCAG
GGCATCGGCT CGAAGCTGTT CGAGCGTGCC GCCATTCGTA GCCGCAATAC GCACGTCACC
ATGCTGTATA TGCACTGCCT GTCGCGCAAT TCGACCATGA TGCATATCGC GAAGAAGGCC
GGCATGAAGA TCGAATACGC GTACGGCGAG GCAGACGCTT ACCTCACGCT GCCGCCGGCG
GATCAATCGA GCATCATCAC GGAAATGCTG CAGGAACAGG CCGCCGTGTT CGACTACGCG
CTCAAGCGGC AGGCGCGTCA GGCGTCGAAG CTGTTCGAAT CGTTCATGCC TACGGCTGTC
GCAGCCTGA
|
|---|
| Protein sequence | MNLTTPRAAE PIVAHDRLMQ PAGRAPALVR ELTEVDRERL LTHFLALDED DRLLRFGQIV
PDHVIENYVR AIDFKRDTVF GVFNNQLQLT GVGHLAYLPA EGDKRTAEFG VSVLESVRGQ
GIGSKLFERA AIRSRNTHVT MLYMHCLSRN STMMHIAKKA GMKIEYAYGE ADAYLTLPPA
DQSSIITEML QEQAAVFDYA LKRQARQASK LFESFMPTAV AA
|
|---|
| |