| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3655 |
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| Symbol | rplA |
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| ID | 6283087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4092252 |
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| End bp | 4092950 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623235 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001897269 |
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| Protein GI | 187925627 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0381514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000000879291 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTAAGC TTTCAAAGCG TCTGCAAGCA TTTGCAGCCA AGGTTGATCG TCAAAAGCTG
TACGCAATCG ACGAAGCCCT GTCGCTCGTG AAGGAATGCG CAAGCGCGAA GTTCGACGAG
TCGATCGACG TCGCAGTGCA GCTCGGTATT GACGCGAAGA AGTCGGACCA AGTGGTTCGT
GGCTCGGTCG TCCTGCCGGC CGGTACCGGT AAGTCTGTTC GCGTTGCAGT GTTCGCGCAA
GGCGAAAAGG CTGAGCAAGC TCGTGCAGCC GGCGCGGAAG TCGTCGGTAT GGAAGACTTG
GCTGAGCAAG TCAAGGCTGG CAAGTTGGAC TTCGACATTG TGATCGCTTC GCCGGACACG
ATGCGCGTCG TCGGTACGCT CGGTCAGATC CTCGGCCCGC GTGGCCTGAT GCCGAACCCG
AAGGTCGGTA CGGTTACGCC GGACGTCGCG ACTGCCGTGA AGAACGCCAA GGCTGGTCAG
GTGCAATTCC GTGTCGACAA GGCCGGTATC ATCCACGCCA CCATCGGCCG TGCTTCGTTT
GAGCCGACAG CTCTGCGTAG CAACCTGAAC GCTCTCGTCG ACGCGCTGCA AAAAGCGAAG
CCGGCAACGA GCAAGGGTGT GTACCTGCGC AAAGTTGCTC TGTCGAGCAC GATGGGCGTT
GGTGTTCGCG TCGACCAGGC ATCGATCGCA GCACAGTAA
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| Protein sequence | MAKLSKRLQA FAAKVDRQKL YAIDEALSLV KECASAKFDE SIDVAVQLGI DAKKSDQVVR
GSVVLPAGTG KSVRVAVFAQ GEKAEQARAA GAEVVGMEDL AEQVKAGKLD FDIVIASPDT
MRVVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQFRVDKAGI IHATIGRASF
EPTALRSNLN ALVDALQKAK PATSKGVYLR KVALSSTMGV GVRVDQASIA AQ
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