| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3644 |
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| Symbol | rplC |
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| ID | 6283117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4074175 |
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| End bp | 4074834 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623224 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001897258 |
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| Protein GI | 187925616 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000185363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000200291 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCCTTG GACTCGTAGG TCGCAAGGTT GGCATGACCC GTATCTTCAC GGCAGAAGGG
GATTCGATTC CCGTTACCGT GCTGGACGTG TCCGACAACC GCGTGACGCA GATCAAGACT
GTTGAAACCG ACGGCTACAC GGCCGTGCAG GTTGCATTCG GTACGCGCCG TGCATCGCGC
GTGACGAAGC CGTTGGCCGG TCATCTCGCC AAAGCCGGTG TTCAAGCCGG TGAAATCCTC
AAAGAATTCC AGATCGATGC TGCCAAGGCT GCCGAGTTGT CGAACGGCAC CGTGGTCGGT
CCCGACCTGT TCGAAGTAGG CCAGAAGGTC GACGTGCAAG GTGTGTCGAT CGGTAAGGGC
TACGCCGGTA CCATCAAGCG TTACAACTTC GCATCCGGCC GTGCATCGCA CGGTAACTCG
CGCTCGCACA ACGTGCCGGG CTCGATCGGT ATGGCGCAGG ATCCGGGTCG TGTTTTCCCG
GGTAAGCGCA TGACCGGTCA CATGGGTGAC GATACGGTAA CCGTGCAAAA CCTCGAAATC
GCTCGTATCG ACGCTGACCG CAAGCTGTTG CTGGTCAAGG GCGCCGTTCC GGGTGCGAAG
GGTGGCAAGG TATTCGTTAC GCCGGCCGTG AAGACGCGTG CCGTGAAAGG AGCGAAATAA
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| Protein sequence | MSLGLVGRKV GMTRIFTAEG DSIPVTVLDV SDNRVTQIKT VETDGYTAVQ VAFGTRRASR
VTKPLAGHLA KAGVQAGEIL KEFQIDAAKA AELSNGTVVG PDLFEVGQKV DVQGVSIGKG
YAGTIKRYNF ASGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD DTVTVQNLEI
ARIDADRKLL LVKGAVPGAK GGKVFVTPAV KTRAVKGAK
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