Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3641 |
Symbol | rplB |
ID | 6284381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4072414 |
End bp | 4073241 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623221 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001897255 |
Protein GI | 187925613 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000585895 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000000261127 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAATCG TTAAAGTTAA GCCGACTTCG CCGGGTCGCC GTGCGATGGT CAAGGTGGTC AACAAGGAAC TGCATAAGGG CAAGCCGTAC GCACCGCTGC TCGACTCGCA ATCCTCGACC GCCGGCCGTA ACAACAACGG TCACATCACC ACCCGTCATA AGGGCGGTGG TCACAAGCAT CACTATCGCG TCGTCGATTT CCGTCGTAAC AAGGACGGTA TCGCAGCGAA GGTCGAACGT CTTGAGTACG ATCCGAACCG TAGCGCGAAC ATCGCGCTGG TTCTGTACGC AGACGGCGAG CGCAAGTACA TCATCGCGCC GAAGGGTTTG ACGGTTGGCC AGCAACTGAT GTCGGGTTCG GAAGCTCCGA TCCGCGCAGG CAATACGCTG CCGATCCGCA ACATCCCGGT CGGTACGACG ATTCACTGCA TCGAAATGCT GCCGGGCAAG GGCGCGCAAA TGGCGCGTTC GGCTGGTACG TCGGCGATGC TGCTGGCTCG TGAAGGCATC TACGCACAGG TCCGCCTGCG CTCGGGTGAA ATTCGCCGCG TTCACGTTGA ATGCCGCGCG ACGATTGGTG AAGTTGGCAA CGAAGAGCAC AGCCTCCGTC AAATCGGTAA GGCTGGCGCG AACCGCTGGC GCGGTATCCG CCCGACGGTG CGTGGCGTTG CAATGAACCC GGTCGATCAC CCGCACGGTG GTGGTGAAGG CAAGACGGCT GCAGGTCGCG ATCCGGTGAG CCCGTGGGGC ACGCCTGCTA AGGGTTATCG CACCCGCAGC AACAAGCGCA CGACGAGCAT GATCGTCCAG CGCCGTCACA AGCGTTAA
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Protein sequence | MAIVKVKPTS PGRRAMVKVV NKELHKGKPY APLLDSQSST AGRNNNGHIT TRHKGGGHKH HYRVVDFRRN KDGIAAKVER LEYDPNRSAN IALVLYADGE RKYIIAPKGL TVGQQLMSGS EAPIRAGNTL PIRNIPVGTT IHCIEMLPGK GAQMARSAGT SAMLLAREGI YAQVRLRSGE IRRVHVECRA TIGEVGNEEH SLRQIGKAGA NRWRGIRPTV RGVAMNPVDH PHGGGEGKTA AGRDPVSPWG TPAKGYRTRS NKRTTSMIVQ RRHKR
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