| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3635 |
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| Symbol | rpsQ |
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| ID | 6282764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4070077 |
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| End bp | 4070349 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642623215 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001897249 |
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| Protein GI | 187925607 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000372531 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000123606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAACGATA GCGTAAAAAC CTCGCTCAAG CGGACGCTGG TCGGCAAGGT CGTCAGCAAT
AAGATGGACA AGACGGTCAC CGTGCTGGTC GAGCACCGCG TGAAGCATCC GATCTACGGC
AAGTACGTTG TGCGCTCGAA GAAATACCAC GCGCACGACG ATGCGAACAC GTATAACGAG
GGCGACCTCG TTGAAATCCA GGAAACGCGT CCGATTTCGA AGACGAAAGC TTGGGTTGTG
GCTCGCCTGG TCGAGGCTGC TCGCGTCATC TGA
|
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| Protein sequence | MNDSVKTSLK RTLVGKVVSN KMDKTVTVLV EHRVKHPIYG KYVVRSKKYH AHDDANTYNE
GDLVEIQETR PISKTKAWVV ARLVEAARVI
|
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