| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3632 |
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| Symbol | rplE |
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| ID | 6282761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4068543 |
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| End bp | 4069082 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642623212 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_001897246 |
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| Protein GI | 187925604 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000391784 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000159528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCTCGTT TGCAAGAGTT TTACAAAGAG AAGGTTGTAC CCGGCCTCAT CGAGAAGTTC
GGTTACAAGT CCGTGATGGA AGTGCCGCGT ATCACCAAGA TCACCCTCAA TATGGGTCTT
GGCGAGGCGG TTGCTGACAA GAAGATCATC GAAAACGCCG TTGGCGATCT GACGAAGATC
GCTGGCCAGA AGCCGGTGAT CACGAAGGCA CGCAAGGCAA TCGCTGGCTT CAAGATCCGT
CAAGGCTATC CGATCGGTGC AATGGTCACG TTGCGTGGTC AGGCAATGTA CGAATTTCTA
GACCGTTTCG TGACGGTTGC GCTCCCCCGG GTGCGTGACT TCCGTGGCGT GTCGGGTCGT
GCGTTCGATG GTCGCGGCAA CTACAACATC GGTGTGAAAG AGCAGATCAT TTTCCCCGAA
ATCGACTACG ACAAGATCGA CGCACTGCGT GGGCTGAACA TCAGCATCAC GACGACTGCG
AAGACTGACG ACGAAGCAAA GGCTCTGCTC GCCAGCTTCA AGTTCCCGTT CAGAAACTGA
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| Protein sequence | MARLQEFYKE KVVPGLIEKF GYKSVMEVPR ITKITLNMGL GEAVADKKII ENAVGDLTKI
AGQKPVITKA RKAIAGFKIR QGYPIGAMVT LRGQAMYEFL DRFVTVALPR VRDFRGVSGR
AFDGRGNYNI GVKEQIIFPE IDYDKIDALR GLNISITTTA KTDDEAKALL ASFKFPFRN
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