Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3626 |
Symbol | rpmD |
ID | 6284689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4066167 |
End bp | 4066349 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642623206 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001897240 |
Protein GI | 187925598 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000585179 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000000133791 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGATA AAACTGTCAA GGTCCAGCTC GTCAAGAGCC TGATCGGCAC CCGTGAAACG CACCGCGCAA CGGTGCGTGG CTTGGGCCTG CGCCGACTCA ACTCGGTTAG CGAGTTGCAG GACACGCCGG CTGTGCGCGG CATGATCAAC AAGGTTTCGT ACCTCGTTAA GGTCATCAGC TAA
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Protein sequence | MSDKTVKVQL VKSLIGTRET HRATVRGLGL RRLNSVSELQ DTPAVRGMIN KVSYLVKVIS
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