| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3617 |
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| Symbol | rplQ |
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| ID | 6284333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4060658 |
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| End bp | 4061050 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642623197 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001897231 |
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| Protein GI | 187925589 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00201184 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000362399 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCACC GTCATGGTTT GCGGAAACTG AACCGCACGA GCAGCCACCG TCTGGCAATG
CTCCGTAATA TGTCCAACTC GCTGATCGAG CACGAAGTCA TCAAGACCAC GCTGCCGAAA
GCAAAAGAAC TCCGTAAAGT TGTCGAGCCG CTGATCACGC TCGGCAAGAA GCCTTCGCTG
GCAAATCGTC GTCTGGCGTT CAATCGCCTG CGCGATCGTG ACTCGGTCAC GAAGCTGTTC
GAAGTGCTGG GCCCGCGTTA CGCTACCCGT CCGGGCGGCT ACCTGCGCGT CCTGAAGTTC
GGCTTCCGCG TTGGCGACAA CGCGCCGATG GCACTGGTCG AATTGCTCGA CCGTCCGGAA
GTTGAAGAAG TCGAAGTGCA AGAAGCTGAG TAA
|
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| Protein sequence | MRHRHGLRKL NRTSSHRLAM LRNMSNSLIE HEVIKTTLPK AKELRKVVEP LITLGKKPSL
ANRRLAFNRL RDRDSVTKLF EVLGPRYATR PGGYLRVLKF GFRVGDNAPM ALVELLDRPE
VEEVEVQEAE
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