| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3612 |
|---|
| Symbol | engB |
|---|
| ID | 6283151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 4056086 |
|---|
| End bp | 4056739 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642623192 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_001897226 |
|---|
| Protein GI | 187925584 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000541311 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000000640023 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTCC TGCTCCACCA ATCCCGCTTT TTCACGACGG TCAATCACTT GCGTGATCTG
CCGGCGACTT CGCAACCCGA GATCTGCTTT GCGGGGCGCT CGAACGCGGG CAAGTCGACG
GCCATCAATA TTCTGTGCAA TCAGAAGCGC TTGGCCTTCG CCAGCAAGAC GCCGGGACGC
ACGCAGCATA TCAATTACTT TTCGGTGGGT AAGGCGGATG AGCCGACCGC GCATCTGGTC
GATCTGCCCG GTTACGGCTA CGCGGAAGTG CCGGGCGCCG CCAAGGCGCA CTGGGAAGCG
CTGCTGTCCA CCTATCTGCA AACGCGCTCG CAGCTGCGCG GCATGATCCT GATGATGGAC
TCGCGCCGCC CGTTGACGGA TCTGGATCGC CGCATGATCG AGTGGTTCGC GCCGACCGGC
AAGCCGATCC ACACGCTGCT GACCAAGTGC GACAAATTGA CCCGCCAGGA AAGCGTCAAC
GCATTGCGTG CGACGCAGAA AGGTCTGGCT GAGTACCGCA CCGCCGGCTA TCAGGGCGAA
CTGACCGCCC AGCTGTTCTC CGCGCTCAAA CGCGTCGGCA TCGACGAAGC ACACGAGCTG
ATTGAAAGCT GGCTGATCCC CAGTGACAAA GGCGAAACGG ACGCCGCTCA GTAA
|
|---|
| Protein sequence | MSFLLHQSRF FTTVNHLRDL PATSQPEICF AGRSNAGKST AINILCNQKR LAFASKTPGR
TQHINYFSVG KADEPTAHLV DLPGYGYAEV PGAAKAHWEA LLSTYLQTRS QLRGMILMMD
SRRPLTDLDR RMIEWFAPTG KPIHTLLTKC DKLTRQESVN ALRATQKGLA EYRTAGYQGE
LTAQLFSALK RVGIDEAHEL IESWLIPSDK GETDAAQ
|
|---|
| |