| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3608 |
|---|
| Symbol | |
|---|
| ID | 6284163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4050358 |
|---|
| End bp | 4051353 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642623188 |
|---|
| Product | putative sulfite oxidase subunit YedY |
|---|
| Protein accession | YP_001897222 |
|---|
| Protein GI | 187925580 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0264425 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000362399 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATCA AACGTAGCGA CAGAATTCTA CTCAGCGGCG ACGACATTGC GCGCAGCGAA
ATCACGCCGC AACATGTTTT TCAGAACCGG CGGCGCGTGT TGCAGGCGGC CGGCGCGGCG
GCGCTCGGCA GTCTGATCGG GGTGAATGGC GAGGCGCTGG CGGCTTACAC GTCGCCGGAT
CCGAAGGCGC AGAAGCTGGC GGCGAAGACC AACGCCAAGT TCGTCGCGCT CGACAAAATC
ACGCCTTACA AGGACATCAC CACGTACAAC AACTTCTACG AGTTCGGCAC CGACAAAGCC
GATCCCGCGC ATAACGCCGG GACGCTGCGG CCGCATCCGT GGAAGGTGAG CGTCGAGGGT
GAGATCAAGA ATCCCAAGGT CTACGATATC GACGAATTGC TCAAGCTCGC GCCGCTCGAA
GAGCGCGTGT ACAGAATGCG CTGCGTCGAA GGCTGGTCGA TGGTGATTCC GTGGATCGGC
GTGCCGCTCG CGGAATTGAT CAAGCGCGTG CAACCGACGG GCAACGCAAA GTACGTACAG
TTCATCACGC TGGCCGATCC GTCGCAAATG CCCGGACTGT CGACGCCCGT ACTCGATTGG
CCATACTCCG AAGGGCTGCG CATGGACGAA GCGATGAATC CGCTGACGTT GCTGACGATG
GGCCTCTACG GCCAGGTGTT GCCTAATCAG AACGGCGCGC CGGTGCGCGT CGTGGTGCCG
TGGAAATACG GCTTCAAGAG CGCGAAGTCG CTGGTGAAGA TCCGCTTCCT CGACAAGCAG
CCGCCGACCA GTTGGAATAC GTATGCATCG AACGAATACG GGTTTTACTC GAACGTGAAT
CCGAACGTCG ATCATCCGCG CTGGAGTCAG GCGACGGAGC GTCGCATCGG CGAAGATGGT
TTCTTCACGC CCAAGCGCAA GACGTTGATG TTCAACGGCT ACGGCGAACA GGTCGCATCG
CTCTATCAGG GCATGGACCT GAAGAAGAAT TTCTGA
|
|---|
| Protein sequence | MWIKRSDRIL LSGDDIARSE ITPQHVFQNR RRVLQAAGAA ALGSLIGVNG EALAAYTSPD
PKAQKLAAKT NAKFVALDKI TPYKDITTYN NFYEFGTDKA DPAHNAGTLR PHPWKVSVEG
EIKNPKVYDI DELLKLAPLE ERVYRMRCVE GWSMVIPWIG VPLAELIKRV QPTGNAKYVQ
FITLADPSQM PGLSTPVLDW PYSEGLRMDE AMNPLTLLTM GLYGQVLPNQ NGAPVRVVVP
WKYGFKSAKS LVKIRFLDKQ PPTSWNTYAS NEYGFYSNVN PNVDHPRWSQ ATERRIGEDG
FFTPKRKTLM FNGYGEQVAS LYQGMDLKKN F
|
|---|
| |