| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3606 |
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| Symbol | |
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| ID | 6284161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4048298 |
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| End bp | 4049560 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623186 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001897220 |
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| Protein GI | 187925578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00198954 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000450016 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCGAT CCGCATTTGA CTACGTCGAT GGCGTGCTGC ACGCCGAAGG CGTGTCCGCC
GTCTCCCTCG CCGAGCAGTT CGGCACGCCG CTGTACGTGT ACTCGCGCGC CGCGCTGACC
GAGGCGTGGA ACGCTTACGC AGGCGCTTGC GCCGGCCGTC GCGCGAGCGT TCATGTGGCC
GTGAAGGCCA ATAGCAATCT CGCGGTGTTG AACGTGTTCG CGCGCCTCGG CGCCGGCTTC
GACATCGTGT CGGGCGGTGA ACTGGCGCGC GTGCTGGCCG CTGGCGGCAG AGCGGAAAAC
ACCGTGTTTT CCGGCGTCGG CAAGCACGCG GACGAAATGC GCGACGCACT CGCGGCCGGC
GTGAAATGCT TCAACGTCGA ATCGATTCCC GAGCTGGACC GCCTGAATGC GGTTGCCGCG
GCAATGGGCA AGAAGGCGCC CGTCTCGCTG CGCGTGAATC CGGACGTTGA CGCGAAGACG
CATCCGTATA TTTCCACGGG CTTGAAGTCG AACAAGTTCG GCGTCGCGTT CGAAGACGCG
CGCGCCACGT ATCAGGCGGC CGCGGCTATG GCGAATCTCG AGGTGGTCGG CATCGACTGC
CATATCGGCT CGCAGATCAC AGAAGTCGCG CCGTATCTCG ACGCCGTCGA CAAGGTTCTG
GAACTGGTCG AGCAGATCGA GCAGGACGGC GTGAAGATTC GTCACATCGA CGTGGGCGGC
GGTCTCGGCA TCACGTACGA CGATGAAACG CCGCCGGAAA TCGGCGAGTT CGTGCGCACC
GTGCTCGATC GCATCGAAGC GCGCGGTCAC GGCCACCGTG AAGTGTATTT CGAGCCGGGC
CGTTCGCTGG TCGGCAACGC CGGCATGCTG CTCACACGCG TCGAGTTTCT CAAGCCGGGC
GCGGAAAAGA ATTTTGCTAT CGTCGACGCA GCCATGACCG ATCTCGCCCG CCCGGCCATG
TACGAGGCGT ATCACGCGAT CGATCCGGTC GTGAAGCGCG ACGTACCGGC TCACGTGTAC
GACGTGGTCG GTCCGGTTTG CGAAAGTGGC GACTGGCTTG GACGTGAGCG TCTGCTGTCT
GTTGAACCGG GCGATCTGCT CGCGATTCGT TCGGCCGGCG CGTATGGCTT CGTGATGAGC
TCGAACTACA ACACACGTCC GCGCGCGGCT GAGGTGATGG TGGATGGTAC ACAGGTGCAC
GTGGTGCGCG CACGCGAAGA GGTGAAGCAG CTGTTTGCGG GCGAAACCAT TCTGCCGGCA
TAA
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| Protein sequence | MIRSAFDYVD GVLHAEGVSA VSLAEQFGTP LYVYSRAALT EAWNAYAGAC AGRRASVHVA
VKANSNLAVL NVFARLGAGF DIVSGGELAR VLAAGGRAEN TVFSGVGKHA DEMRDALAAG
VKCFNVESIP ELDRLNAVAA AMGKKAPVSL RVNPDVDAKT HPYISTGLKS NKFGVAFEDA
RATYQAAAAM ANLEVVGIDC HIGSQITEVA PYLDAVDKVL ELVEQIEQDG VKIRHIDVGG
GLGITYDDET PPEIGEFVRT VLDRIEARGH GHREVYFEPG RSLVGNAGML LTRVEFLKPG
AEKNFAIVDA AMTDLARPAM YEAYHAIDPV VKRDVPAHVY DVVGPVCESG DWLGRERLLS
VEPGDLLAIR SAGAYGFVMS SNYNTRPRAA EVMVDGTQVH VVRAREEVKQ LFAGETILPA
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