Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3598 |
Symbol | aroK |
ID | 6283026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4039660 |
End bp | 4040211 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623178 |
Product | shikimate kinase |
Protein accession | YP_001897212 |
Protein GI | 187925570 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000887516 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000000252706 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAAGCGC GGGACGCACA CGCCAATGTA TTTTTCGTAG GGCTCATGGG GGCAGGGAAA ACCACCGTGG GCCGGGCCAT TGCGCGCCGT CTCGATCGCC CGTTCTTCGA TTCCGACCAT GAAATCGAGG CGCGCACGGG CGCGCGCATC CCGGTGATCT TCGAGCTGGA GGGCGAAGCG GGATTTCGCG AGCGCGAAGC CAGCGTGATT TCCGACCTGA CCGGACGTGA CAGTATCGTC CTCGCCACCG GCGGCGGCGC GATACTGCGG CCGGAAAACC GCGAAGCGCT GCAAAATCGC GGAGTGGTGA TCTATTTGCG AGCCAATCCG CACGACCTGT GGCTGCGCAC CCGGCGCGAC AAGAATCGTC CGCTGTTGCA GACCGAAGAC CCCAAAGCGC GTCTCGAAGC ACTCTACGAA GTGCGCGATC CGTTATACCG GGAATGCGCG CATTTCGTGA TCGAAACCGG CCGACCTTCG GTCAACGGAC TCGTCAACAT GGTTCTGATG CAGCTCGAGA TGGCCGGCGT CGCCAAACAT CCTGCGTCAT AA
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Protein sequence | MQARDAHANV FFVGLMGAGK TTVGRAIARR LDRPFFDSDH EIEARTGARI PVIFELEGEA GFREREASVI SDLTGRDSIV LATGGGAILR PENREALQNR GVVIYLRANP HDLWLRTRRD KNRPLLQTED PKARLEALYE VRDPLYRECA HFVIETGRPS VNGLVNMVLM QLEMAGVAKH PAS
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