Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3576 |
Symbol | |
ID | 6281082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4014823 |
End bp | 4016574 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623156 |
Product | ABC transporter domain protein |
Protein accession | YP_001897190 |
Protein GI | 187925548 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0754799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000117282 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACACCGA ATACCTCTGC CACCCCCGTG CTGCCGCCGG ACGAAAAAGT CTCCGCCTGG AGCCTGATCA AACCCTACTG GGTTTCCGAA GAACGAAAAA CGGCATGGGG CCTGCTCATC GCGATCATCG TGATGAATCT GCTCGTGGTG TGGATCAACG TACGGCTGAA CCGCTGGAGC GCCGACTTCT ACAACGCGCT GCAAACCAAG AACGTGCGCG ACTTCCCTCA CCTGCTGATG GTGTTCTCGG GGCTCGCGTT CGGCTTCATC ATTCTCGCGG TGTACGGCCG TTATCTGCGT CAGATGCTCG GCTTCCGCTG GCGCCAGTGG CTGACCACGC GCTATCTGAA CGAGTGGCTG AACGACAGCG CGTTCTACCG GATCGAACGC GATCGCCTCG CCGACAACCC CGACCAGCGG ATCAGCGACG ACCTGCAGTC GTTCGCCACC AGCACGCTCT CGTTGACGCT CGACCTGCTG TCCACCGTCG TCACGCTGGT GTCGTTCATC ACCATCCTGT GGTCGCTGGC CGGCGCACTG ACCATTTCGC TCGGCGGCAT GCCGATCGAG ATTCCCGGCT ACATGGTATG GGCCGCGGCG CTCTACGCCG TGGTCGGCTC GCTGATTATC CAGAAGGTCG GCCATCCGCT CGTGCCGATC AATTACCAGG CGCAGAAAGT AGAGGCGGAT TTCCGTTTCG GCCTGATCCG TCTGCGTGAA AACGCCGAGC AGATCGCGTT CTACAACGGC ATGGATACCG AGAAAGCGAA CGCGCACTCG CTGTTCGGCC GCATCCGCGA CAACTGGTGG CAGGTGATGA AGTACACCAA GCGGCTCACC TTCGTGCTGA GCTTCTATGG CCAGATCGCG ATCATCTTCC CGCTGGTGGT CGCCGCGCCG CGCTACTTTG CCGGCGCCTT CACGTTCGGC GTGCTGATGC AGATCTCCAG CGCCTTCGGC ACCGTCAGCG ATTCGTTCTC GTGGTTCATC AACAGTTACG GCACCTTGGT CGAATGGCGC GCTACCGTGA ACCGGTTGCG TGAATTCAAG CGCGTCGTGC ATGCACCGCG TCTGAAGGAA TCGGTCTCGC CGGCTACCGC GCATGGCGGC ATCAATCTGC ATTTCGTCGA CGAAGACAAG CTCTCCACCG AAGGCCTCAA GCTCGCCCTG CCTAACGGCA ACCCGCTGTC GCGCATTCGC GATGTGGCGA TTCAGCCGGG CTCGCGCTGG CTGGTGCGCG GCCCGTCAGG CTCGGGCAAG AGCACGCTGA TGCGCGCGCT CGCCGGTTTA TGGCCGTTCG GCGACGGCTC GATCGATGCC CCGGTCAACG CCCGCATGAT GTTCATCCCA CAGGTCAGCT ACATGCCGAT CGGCACGCTC AAAGCGGCGC TCGCCTATCC GTCGGCCGCC AGCACCTACA CCGACGACGA ATGCCGCGAG GCGCTCATCG TCTGCCATCT GTCGGAATAC GCGGACCGTC TGCAGGAATC GGGACACTGG ACTCGTATTC TGTCGCCGGG CGAGCAGCAG CGCCTCGCCG CCGCGCGCGT GCTGCTGCAC AAGCCCGACT ATCTGTTCCT CGACGAAGCC ACCAGTGCGC TCGACGCGGA AAACGAGGCG CGTTTGTACC GCCTGTTCAC GGAGCGGCTG CCGAAGGCGG CGATTGTGAG CGTCGCGCAT CGCGAGTCGC TGGCCGCGTT CCATGACGAG ACGCTCGACG TCGAGCGCTC GGGCGAAGCG GTCGCGGCAT GA
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Protein sequence | MTPNTSATPV LPPDEKVSAW SLIKPYWVSE ERKTAWGLLI AIIVMNLLVV WINVRLNRWS ADFYNALQTK NVRDFPHLLM VFSGLAFGFI ILAVYGRYLR QMLGFRWRQW LTTRYLNEWL NDSAFYRIER DRLADNPDQR ISDDLQSFAT STLSLTLDLL STVVTLVSFI TILWSLAGAL TISLGGMPIE IPGYMVWAAA LYAVVGSLII QKVGHPLVPI NYQAQKVEAD FRFGLIRLRE NAEQIAFYNG MDTEKANAHS LFGRIRDNWW QVMKYTKRLT FVLSFYGQIA IIFPLVVAAP RYFAGAFTFG VLMQISSAFG TVSDSFSWFI NSYGTLVEWR ATVNRLREFK RVVHAPRLKE SVSPATAHGG INLHFVDEDK LSTEGLKLAL PNGNPLSRIR DVAIQPGSRW LVRGPSGSGK STLMRALAGL WPFGDGSIDA PVNARMMFIP QVSYMPIGTL KAALAYPSAA STYTDDECRE ALIVCHLSEY ADRLQESGHW TRILSPGEQQ RLAAARVLLH KPDYLFLDEA TSALDAENEA RLYRLFTERL PKAAIVSVAH RESLAAFHDE TLDVERSGEA VAA
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