| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3569 |
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| Symbol | |
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| ID | 6281620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4008372 |
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| End bp | 4008932 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623149 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_001897183 |
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| Protein GI | 187925541 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0424468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000173433 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA CTGCTGCTCT CGACTTCTGG GTCGGCCTGT TCGTGGTGCT GGGTTTCGTG
GCGTTGCTGT TTCTCGCGCT GAAGGCCGGC AACATGAGCT CGTTGTCGTT CCAGCCGACC
TATCCGGTCA AGCTCAAGTT CGACAATATC GGCGGACTGA AGGCCCGCGC GCCCGTGAAG
AGCGCGGGTG TGACGGTCGG CCGCGTCGCT TCGATCGGCT TTGACAGCAA TGCATATCAG
GCGCTCGTCA CGATCGACCT CGACAAGCAA TACCAGTTTC CGAAAGACAC CTCGGCGAAG
ATTTTGACCT CGGGGCTGCT CGGCGAGCAA TACATCGGGC TCGAACCCGG CGGCGACAGC
GAAATGCTCA AGGCGGGCGA CACCATCTCC ATGACGCAAT CGGCGATCGT GCTGGAAAAC
CTCATCGGCC AGTTTCTGTA CAGCAAGGCC GCGGATTCGG GGGCGTCCAA ACCTGGCGCG
GCGGCGGGTG CTCCCACGCC GGCGCCTTCC GCAGCGCCTG CAGCGTCGAG CTTGCCCGCC
TCCGGCGCGG CCGCTCAATA A
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| Protein sequence | MKKTAALDFW VGLFVVLGFV ALLFLALKAG NMSSLSFQPT YPVKLKFDNI GGLKARAPVK
SAGVTVGRVA SIGFDSNAYQ ALVTIDLDKQ YQFPKDTSAK ILTSGLLGEQ YIGLEPGGDS
EMLKAGDTIS MTQSAIVLEN LIGQFLYSKA ADSGASKPGA AAGAPTPAPS AAPAASSLPA
SGAAAQ
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