| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3555 |
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| Symbol | |
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| ID | 6282770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3996480 |
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| End bp | 3997232 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623135 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001897169 |
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| Protein GI | 187925527 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0302332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00025848 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCTGA TTCCCGCCAT CGACCTGAAA GACGGTCAGT GTGTACGCCT CAAACAAGGC
GATATGGACC AGGCGACGAT ATTTTCCGAG GAACCGGCGG CGATGGCCCG ACATTGGGTC
GATCGCGGTG CCCGGCGTCT CCACCTCGTC GACCTGAATG GCGCGTTCGC CGGCAAGCCG
AAGAATGAAG ACGCGATTCG CGCGATCATC GAGGAGGTGG GCGGCGAGAT TCCCGTGCAA
CTGGGCGGCG GCATTCGCGA CCTGAATACG ATCGAGCGCT ATCTGGACGA CGGTTTGTCG
TACGTGATCA TCGGCACGGC GGCAGTGAAG AACCCCGGCT TTCTGCAGGA CGCCTGCACG
GCGTTCGGCG GCCATATCAT CGTCGGACTG GATGCGAAAG ACGGCAAGGT GGCGACCGAC
GGCTGGAGCA AGCTGACCGG CCACGAAGTG GCCGATCTCG CGCGCAAGTT CGAGGACTAC
GGCTGCGAGT CGATCATCTA CACCGACATC GGCCGCGACG GCATGCTTCA GGGCATCAAC
ATCGAAGCGA CGGTGCGCCT CGCGCGCGCA GTGAAGATTC CGGTGATCGC AAGCGGCGGC
TTGTCCAACC TCACCGACAT CGAATCGCTG TGCGAAGTCG AAGACGAAGG CATTGAAGGT
GTGATCTGCG GCCGGGCGAT CTACTCGGGC GATCTCGACT TCGCGGCCGC GCAAACCCTC
GCGGACCGGC TGCGCGAATC GGACGACGCC TAA
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| Protein sequence | MLLIPAIDLK DGQCVRLKQG DMDQATIFSE EPAAMARHWV DRGARRLHLV DLNGAFAGKP
KNEDAIRAII EEVGGEIPVQ LGGGIRDLNT IERYLDDGLS YVIIGTAAVK NPGFLQDACT
AFGGHIIVGL DAKDGKVATD GWSKLTGHEV ADLARKFEDY GCESIIYTDI GRDGMLQGIN
IEATVRLARA VKIPVIASGG LSNLTDIESL CEVEDEGIEG VICGRAIYSG DLDFAAAQTL
ADRLRESDDA
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