Gene Bphyt_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3551 
Symbol 
ID6282766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3994175 
End bp3994570 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content60% 
IMG OID642623131 
Producthypothetical protein 
Protein accessionYP_001897165 
Protein GI187925523 
COG category[S] Function unknown 
COG ID[COG3671] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0392282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000178904 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACAGT CGCACGAGAG CTATCCGCCG CCGGTCTATC GCAATGCTCT CGAACCTGAG 
CGCGAGCGCA GCCTGCGTAC GCTTACCCAC GTGCTGTACG CGCTGTATGC GGTCCACTGG
CTGACGGGCG GCCTGACGAT CCTGATCGCG ATCATCATCA ACTACGTAAA GCGGCCCGAT
GTGGTCGGCA CGCCGTACGA GGCCCATTTC GAGTGGCAGA TCCGCTCCTT CTGGATGGCC
TTGCTGGGCT ACGCGATCGG CGGTGTGCTG CTGTTCGTGG TGATCGGCAT TCCCGTTCTG
TGGGCCGTGA GCATCTGGAT GTTGTACCGT ATTATCAAGG GCTGGCTGTA TCTGTACGAT
AACAAGCCGC TCGCGAATCC GCGTGGCTGG TTCTGA
 
Protein sequence
MEQSHESYPP PVYRNALEPE RERSLRTLTH VLYALYAVHW LTGGLTILIA IIINYVKRPD 
VVGTPYEAHF EWQIRSFWMA LLGYAIGGVL LFVVIGIPVL WAVSIWMLYR IIKGWLYLYD
NKPLANPRGW F