| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3546 |
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| Symbol | |
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| ID | 6283803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3990520 |
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| End bp | 3991743 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623126 |
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| Product | 2-alkenal reductase |
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| Protein accession | YP_001897160 |
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| Protein GI | 187925518 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.416625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00882944 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTAGAC GCTTTTGGCT GTTCTTTGCC CAAGCGGTGA CCGTGCTGTT GGCGCTCATG
TTCATCATTG CGACCCTCAA ACCGCAGTGG CTCCAGCGTC AAGGGCAATT CGGCAAGCAA
CTCGCCGAAC CGATCGTCGC GCTGCGGGAA GTAGCGCCAG GCATCGGGAG CGGCCCAGCT
CAGGCGTCGT ACGCGGACGC CGCGCAAAAG GCCATGCCCG CGGTCGTCAA TGTGTTTTCC
AGCAAGGATG GCTCACTGCC GCCCGACCCG CGCGCGAAAG ATCCGCTATT CCGCTACTTC
TTCGGCGACA AGAACCGCAA GCAGCAGGAA CAGCCCGCGT CCAATCTGGG CTCTGGCGTG
ATAGTGAGTT CGGAAGGTTA CATTCTAACG AACCAGCACG TCGTGGACGG TGCCGATCAG
ATCGAAATCG CGCTTGCCGA CGGCCGCACC ACGAATGCCA AGGTGATCGG CATCGATCCG
GAAACCGATC TGGCCGTGCT CAAGGTCAAC ATGACCAACC TGCCCACCAT CACACTCGGC
CGCATGGACC AGACGCGTGT GGGCGACGTG GTGCTTGCCA TCGGCAATCC GTTCGGCGTC
GGCCAGACGG TGACCATGGG CATTGTCAGC GCGCTCGGGC GCAATCACCT CGGCATCAAC
ACGTTCGAAA ACTTCATTCA GACCGACGCG GCCATCAACC CGGGCAACTC GGGTGGCGCG
CTGGTCGACG TGAACGGCAA CCTGCTCGGC ATCAACACCG CCATCTATTC GCGCTCGGGC
GGCTCGCTCG GCATCGGCTT CGCGATTCCC GTTTCGACAG CGAGGAGCGT GCTGGAGAGC
ATCATCACCA CGGGTTCGGT CACGCGCGGC TGGATCGGCG TCGAACCGCA GGACGTTACG
CCGGAGATCG CCGAATCGTT CGGGCTGGAG CAGAAGTCGG GCGCGATTGT CGCGGGCGTG
CTGAAGAACG GCCCGGCGGA CCGTGCGGGC ATCAAACCGG GCGACATTCT CGTGAGCGTG
AACGGCCAGG AAATTACCGA CACCACGCGT CTGCTGAATG TGATCGCGCA GATCAAGCCG
GGCACGGCCG CGAAGGTGCA TCTGGTGCGC AAGAGCCGCG AGATGGATCT GGATGTCACC
ATCGGCAAAC GCCCGCCTCC GCCGAAGCAA CCAGCCGAAG ACAATGGCGG CGGCAGCGGC
GATCAGGACG ACGACGGCGG TTGA
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| Protein sequence | MLRRFWLFFA QAVTVLLALM FIIATLKPQW LQRQGQFGKQ LAEPIVALRE VAPGIGSGPA
QASYADAAQK AMPAVVNVFS SKDGSLPPDP RAKDPLFRYF FGDKNRKQQE QPASNLGSGV
IVSSEGYILT NQHVVDGADQ IEIALADGRT TNAKVIGIDP ETDLAVLKVN MTNLPTITLG
RMDQTRVGDV VLAIGNPFGV GQTVTMGIVS ALGRNHLGIN TFENFIQTDA AINPGNSGGA
LVDVNGNLLG INTAIYSRSG GSLGIGFAIP VSTARSVLES IITTGSVTRG WIGVEPQDVT
PEIAESFGLE QKSGAIVAGV LKNGPADRAG IKPGDILVSV NGQEITDTTR LLNVIAQIKP
GTAAKVHLVR KSREMDLDVT IGKRPPPPKQ PAEDNGGGSG DQDDDGG
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