| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3543 |
|---|
| Symbol | |
|---|
| ID | 6282928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3987499 |
|---|
| End bp | 3988878 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642623123 |
|---|
| Product | Cytochrome b/b6 domain |
|---|
| Protein accession | YP_001897157 |
|---|
| Protein GI | 187925515 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.789963 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0181862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG AACACGAAGT AGAGACGACC GGGCTGGTCG GCTGGATCGA CCGGCGCTTT
CCGCTGACTT CCACGTGGAA GAAGCACGTT TCCGAGTACT ACGCGCCGAA GAACTTCAAC
TTCTGGTACT TCTTCGGTTC GCTTGCCCTG CTGGTGCTGG TCAACCAGAT CGTCACCGGT
ATCTTCCTCA CCATGAACTA CAAGCCCGAC GCGACGCTCG CGTTTTCGTC GGTCGAGTAC
ATCATGCGCG AGGTGCCGTG GGGCTGGCTG ATCCGCTATA TGCACTCCAC GGGCGCGTCG
ATGTTTTTCG TCGTCGTCTA TCTGCATATG TTCCGTGGGC TGATGTACGG CTCGTACCGC
AAGCCGCGCG AACTGGTGTG GATTTTCGGC TGCGCGATTT TCCTGTGTCT GATGGCTGAA
GCGTTTTTCG GCTATCTGCT GCCTTGGGGG CAAATGTCGT TCTGGGGCGC GCAGGTGATC
GTCAACCTGT TCTCAGCGAT TCCGTTTATC GGGCCGGACC TGTCGCTGTG GATTCGCGGC
GACTACGTGG TCTCGGACGT CACGCTGAAC CGCTTCTTCG CGTTCCACGT GATCGCGATT
CCGCTGGTGC TGATCGGGCT GGTGGTCGCT CACCTGGTCG CGCTGCACGA AGTGGGATCG
AACAACCCGG ACGGCATCGA GATCAAGGCG AAGAAGGATC CGGACGGCAT TCCGATCGAT
GGCATTCCGT TCCATCCGTA CTACTCGGTG CACGATTTCA TGGGCGTGTC GGTGTTCCTG
CTGATCTTCG CGGCGATCAT TTTCTTCGCG CCGGAGATGG GCGGGTATTT CCTCGAAGCG
AACAACTTCG TGCCGGCCAA TCCGCTGCAA ACGCCGCCTG AAATTGCGCC GGTGTGGTAT
TTCACGGCGT TCTACGCGAT GCTGCGCGCC ACGACGGATC CGTTCAAGAT CGTGCTGATG
GTGATAATCG GGTTGCTCGG CCTGCTCGCG CTGGTGCGCG CCCGCGGAAA ATGGAAACTC
GGCCTGCCGG TGCTCGCTGT GCTGGTGATT TTGGCGATGG CGTTCACCGA ATCGAAGTTC
TGGGGCGTGG TGGTGATGGG CAGTGCGGTG GTGTCGCTGT TCTTCCTGCC TTGGCTCGAC
CGGTCGCCGG TCAAGTCGAT CCGTTACCGG CCGTTTTTTC ACAAGGTGTT CTACGGGATC
TTCGTGCTCG TGTTCCTGAC GCTGGCCTTC CTCGGCACTA AACCGCCGTC GCCGACCGCC
ACGCTGATCG CGCAGGTTTG TGCGCTGATC TACTTCGCGT TTTTCCTCGG TATGCCGTTC
TGGACGCGGC TTGGCACGTT CAAGCAGCCG CCCGAGCGGG TGCGGTTCAA GCCTCACTAA
|
|---|
| Protein sequence | MAIEHEVETT GLVGWIDRRF PLTSTWKKHV SEYYAPKNFN FWYFFGSLAL LVLVNQIVTG
IFLTMNYKPD ATLAFSSVEY IMREVPWGWL IRYMHSTGAS MFFVVVYLHM FRGLMYGSYR
KPRELVWIFG CAIFLCLMAE AFFGYLLPWG QMSFWGAQVI VNLFSAIPFI GPDLSLWIRG
DYVVSDVTLN RFFAFHVIAI PLVLIGLVVA HLVALHEVGS NNPDGIEIKA KKDPDGIPID
GIPFHPYYSV HDFMGVSVFL LIFAAIIFFA PEMGGYFLEA NNFVPANPLQ TPPEIAPVWY
FTAFYAMLRA TTDPFKIVLM VIIGLLGLLA LVRARGKWKL GLPVLAVLVI LAMAFTESKF
WGVVVMGSAV VSLFFLPWLD RSPVKSIRYR PFFHKVFYGI FVLVFLTLAF LGTKPPSPTA
TLIAQVCALI YFAFFLGMPF WTRLGTFKQP PERVRFKPH
|
|---|
| |