Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3541 |
Symbol | |
ID | 6282926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3986015 |
End bp | 3986626 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642623121 |
Product | Glutathione S-transferase domain |
Protein accession | YP_001897155 |
Protein GI | 187925513 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.468115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.06049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGTTC TGTATTCCGG CACAACTTGC CCGTTCTCCC AGCGCTGCCG GCTGGTGTTG TTCGAAAAGG GCATGGACTT CGAGATCCGC GACGTCGACC TGTTTAACAA GCCGGAAGAC ATCGCCGTGA TGAATCCGTA TGGTCAGGTG CCGATTCTCG TCGAACGGGA CCTGATTCTG TACGAATCGA ACATCATCAA CGAATATATC GACGAGCGCT TCCCGCACCC GCAACTCATG CCGGCCGATC CGGTGCAGCG TGCCCGCGCC CGCCTGTTCC TGCTGAACTT CGAGAAAGAG CTGTTCGTTC ACGTCGGCAC GCTCGAAAAC GAAAAGGGCA AGGCTGCGGA GAAGAATCAC GAGAAAGCCC GTCTGGCGAT CCGCGATCGT CTGACGCAAC TCGCGCCGAT CTTCCTGAAG AACAAGTACA TGCTCGGCGA AGAGTTCTCG ATGCTCGACG TCGCGATCGC ACCGTTGCTG TGGCGTCTGG ATCACTACGG CATCGAACTG TCGAAGAACG CCGCGCCGCT GATGAAGTAC GCCGAGCGCA TTTTCAGCCG CCCGGCTTAT ATCGAAGCGC TGACGCCTTC GGAAAAGGTG ATGCGTCGTT GA
|
Protein sequence | MMVLYSGTTC PFSQRCRLVL FEKGMDFEIR DVDLFNKPED IAVMNPYGQV PILVERDLIL YESNIINEYI DERFPHPQLM PADPVQRARA RLFLLNFEKE LFVHVGTLEN EKGKAAEKNH EKARLAIRDR LTQLAPIFLK NKYMLGEEFS MLDVAIAPLL WRLDHYGIEL SKNAAPLMKY AERIFSRPAY IEALTPSEKV MRR
|
| |