Gene Bphyt_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3539 
Symbol 
ID6282923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3983822 
End bp3984946 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID642623118 
Productmethyltransferase small 
Protein accessionYP_001897153 
Protein GI187925511 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.332123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.160563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC CCGCAACCAT CACCTGGCCC GAAGCCGACG GCCCCCGCTC CGCGCGTTGG 
CGCTCCGAAG CAGCCGTGCC GCCGCCCAAG CGCGTCATCG TCGCGGACGA CCGCACCACC
GCAGATTCCG CCTACCGACT GGCGTGCGAA GGGACGGCGC TGTTGTGGAA CGGCGACTTC
CAGAACGCTC GCCAGTTGCT GCAAGCGGTG ACGCGCCGAC TGGAGCGCAA ACCGCGCAAG
CAGGGCGAAA CGCCGCTCGA CGCATTCAAC CTGCATCGGC AGGCGCAGTC GCAACGCGCG
CGCACGCTCG GCATGATCCT GATTCCGCTG GACTCCGCTT ACGGTATTCC GCTGCGCCGC
GCGCCCGATG TCCAGCAAGC CTGCATCGAA ACCTACGGAC CGCCGACCGA CGAGCCGTCC
GTCGTGTCGC TGCGTGAACT GCTTGGCATG ATCGGCGCGC ACGAGTGGCG CAGGAAGGGC
GTCGAGATTC CCGCGTTGGG CGAACGGATT CATCCGCATT ACGGCGTGTT CTCGCCGGTA
CGCGGCGAAT ATGTGGACCT CGTCGCGAGC ACGCCGCTGC CTTCGCTGAA CAAGGCGTTC
GATATCGGCA CGGGCACGGG CGTGCTCTCG GCGCTGCTCG CCAAACGCGG CGTGAAGAAA
ATCGTCGCTA CCGATCAGGA TCCGCGCGCG CTCGCTTGCG CGCGCGAAAA CCTCACGCGT
CTCGGTTACG ACCAGCAGGT CGACGTCGTG CAGGCCGATT TGTTTCCCGA AGGCCGCGCG
CCGCTCGTGG TGAGCAATCC GCCGTGGGTG CCGGCAAGGC CCGCTTCGCC GATCGAGTAC
GCGATCTACG ATCCGGAAAG CCGCATGCTG CTCGGTTTCC TGAACGGGCT GGCGGAGCAT
CTGTCGCCGG GTGGGGAAGG CTGGCTGATC ATGTCCGATT TCGCGGAGCA TCTTGGCTTG
CGCACGCGCG ACTGGCTGCT GGCCGCCATC GACAAGGCGG GGCTGACAGT GGCGGGTCGC
GAGGACATTC GTCCGCGCCA CCCCAAGTCG ACCGATGAAA CCGATGCGCT GCACACGGCG
CGCATGGCCG AAGTGACGTC GCTCTGGCGT TTGAAGGCGC GCTAA
 
Protein sequence
MTSPATITWP EADGPRSARW RSEAAVPPPK RVIVADDRTT ADSAYRLACE GTALLWNGDF 
QNARQLLQAV TRRLERKPRK QGETPLDAFN LHRQAQSQRA RTLGMILIPL DSAYGIPLRR
APDVQQACIE TYGPPTDEPS VVSLRELLGM IGAHEWRRKG VEIPALGERI HPHYGVFSPV
RGEYVDLVAS TPLPSLNKAF DIGTGTGVLS ALLAKRGVKK IVATDQDPRA LACARENLTR
LGYDQQVDVV QADLFPEGRA PLVVSNPPWV PARPASPIEY AIYDPESRML LGFLNGLAEH
LSPGGEGWLI MSDFAEHLGL RTRDWLLAAI DKAGLTVAGR EDIRPRHPKS TDETDALHTA
RMAEVTSLWR LKAR