Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3532 |
Symbol | |
ID | 6282524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3977486 |
End bp | 3978769 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623111 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001897146 |
Protein GI | 187925504 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.697797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.296652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGGG CAGCAAGACT GATTGGCGGA CGTTTCCACT ACGGCTGGTT GACCGTCGCG GTGGTGTTTC TGGTACTGCT GGCGGCGGCC GGCACGCGCG CCACGCCGAG CGTGATGATG CTGCCGCTCG AGCATCAGTT CGGCTGGAGC CGCGCAACGA TTTCTCTCGC GATCTCCGTG AACATTGCGC TGTACGGTCT GATGGGACCG TTCGCGGCCG CGGCGATGCA ACGTTTCGGT GTACGCCCCA CGCTGCTGGC CGCGCTCGGG ACGATGGCGC TGGGCGTCGC GCTATCTTCG CTGATGACGC ACCCTTGGCA AATGGTGCTC ATCTGGGGCG TGATGGTCGG TGGCTCGACG GGGGTCGCGG CGCTGTCGTT GTCGGCGACG GTGGTGACGC GCTGGTTCAC CACGCGGCGC GGGCTCGTCA TGGGCATTCT CACGGCGAGT TCGGCAACCG GCCAACTCGT GTTTCTGCCG ATGCTCGCTG CCATCGCCGA GCACCATGGC TGGCGGCAAG TGGTGTGGGT CGTCGCCATT GCGGCCGCGA TCGTGATTCC GCTGGTTGCG TTTTTGCTGC CCGAGCGCCC GGCCGACATG AAGCTGCGCC CGTACGGCGA ACCGCACGAT TCGCCCATCA ACAGCACCGT CACCAAACAG AATCCGTTGG CGATCGCCTT CGGCACACTG GCCATGGCGA GCAAGACGCG CGATTTCTGG CTGCTGTTCT TCAGCTTCTT TATCTGCGGC GCGAGTACCA ACGGCTATGT CGGCACCCAC CTGATCGCGA TGTGCGGCGA CTACGGCATG ACGGAAGTGC AGGGCGCTTC GCTGCTCGCC GCGATGGGCA TCTTCGACCT GTTCGGCACG ACGCTCTCCG GCTGGTTGTC GGACCGCTTC AATAGCCGCG TGCTGCTGTT CTGGTACTAC GGTCTGCGCG GTTTGTCGCT GATGTATCTG CCGCATGCGT TCGGCATCGA CTTCTTCGGG CTGCCGCTGT TCGCCGTGTT CTACGGACTC GACTGGATCG CGACCGTGCC GCCGACCGTG CGTCTGGCCA CCGACGTCTA CGGCAAGGAA TCGGCGCCGG TGGTGTTCGG CTGGGTCGTC GCCGGCCATC AGCTCGGTGC GGCGTTTGCG GCACTCGGCG CGGGTATGCT GCGCGCGAGC CTCGGCACGT ACACGGTGGC GTCGATGATT TCCGGCGGCT TGTGCCTCGT GGCGGCGGTG ATCGTATTGC GGATCAACCG GCCCGCCAAA GTGCCGGAAC CGCAGGCGGC ATAA
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Protein sequence | MNWAARLIGG RFHYGWLTVA VVFLVLLAAA GTRATPSVMM LPLEHQFGWS RATISLAISV NIALYGLMGP FAAAAMQRFG VRPTLLAALG TMALGVALSS LMTHPWQMVL IWGVMVGGST GVAALSLSAT VVTRWFTTRR GLVMGILTAS SATGQLVFLP MLAAIAEHHG WRQVVWVVAI AAAIVIPLVA FLLPERPADM KLRPYGEPHD SPINSTVTKQ NPLAIAFGTL AMASKTRDFW LLFFSFFICG ASTNGYVGTH LIAMCGDYGM TEVQGASLLA AMGIFDLFGT TLSGWLSDRF NSRVLLFWYY GLRGLSLMYL PHAFGIDFFG LPLFAVFYGL DWIATVPPTV RLATDVYGKE SAPVVFGWVV AGHQLGAAFA ALGAGMLRAS LGTYTVASMI SGGLCLVAAV IVLRINRPAK VPEPQAA
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