| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3527 |
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| Symbol | |
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| ID | 6280910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3971301 |
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| End bp | 3972968 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623106 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001897141 |
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| Protein GI | 187925499 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0238018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.261752 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTGC TGCAACTTGC ATGGGGCGGA GTCAGCGCCA AAGCGCTCAC TCCCGCCGAA
ACAGGAGAAG ACGTGAAAAG TTCTATACAA CGGAACATCG GCCCGTTCGC GCTGATGCTG
ACCGGCTTAG GTTCCATCAT CGGATCGGGC TGGCTGTTCG GCGCGTGGAA GGCTGCAAAA
ATTGCCGGTC CCGCTGCCGT TTGTGCATGG GTGATCGGCG CGGTCGTGAT TCTCGCGATC
GCGTTGACCT ACGCCGAACT CGGCGCGATG TTCCCGGAGT CCGGCGGCAT GGTGCGTTAC
GCGCGCTATT CGCACGGCGC GCTGGTGGGT TTCATTAGCG CATGGGCCAA CTGGATTGCC
ATTGTCTCGG TGATTCCGAT TGAGGCTGAA GCGTCCATTC AATATATGAG TACGTGGCCC
TATCCATGGG CGCATGCGCT ATTCGTCGAT GGATCATTAA CCACGAACGG GTTATTGCTG
TCCGCGGCGC TGGTGATCAT TTACTTCATG CTGAACTACT GGGGCGTGAA ACTGTTTGCG
CGCGCCAATT CGGCGATCAC GATCTTCAAG TTCCTGATTC CCGGCGCGAC GATCCTCGGT
TTGATGTTCG CGGGCTTCCA CAAGGAAAAC TTCGGTGAAG CGAGCACCTT CGCGCCGTAC
GGCTGGTCGG CGGTGCTGAC TGCGGTATCG ACGAGCGGCA TCGTGTTCGC GTTCAACGGT
TTCCAAAGCC CGATCAATCT CGCGGGGGAA GCGCGCAATC CGGCCAAAAG CGTGCCGTTC
GCGGTGATCG GCTCGATCCT GCTGGCACTG GTGATCTACG TTCTGCTGCA GATTGCGTAT
ATCGGCGCGG TGAATCCGAG CGACGTGATG AAGGGCTGGA GCCACTTCAA CTTCGCTTCG
CCGTTCGCGG AACTCGCTAT CGCGTTGAAC CTGAACTGGC TGGCGATCCT GCTGTACGTC
GACGCATTCG TCAGCCCGAG CGGCACCGGC ACGACCTACA TGGCGACCAC CAGCCGCATG
ATTTACGCCA TGGAACGCAA CAACACGATG CCGAAGATGT TCGGCAACGT CCACCCGTTC
TACGGCGTGC CGCGTCAGGC GATGTGGTTC AACCTGCTGG TGTCGTTCAT TTTCCTGTTT
TTCTTCCGCG GCTGGAGTTC GCTCGCGGCG GTGATTTCGG TCGCAACCGT GATTTCGTAC
CTGACCGGCC CGATCAGCCT GATGGCGCTG CGCCGTGCGG CGACGGACCT CGAGCGTCCG
CTGCATATCC CGGGCATGAA GATCATTGCG CCGTTCGCGT TCGTCTGCGC GTCGCTGATC
CTGTACTGGG CGAAGTGGCC GCTGACCGGC GAAATCATTC TGCTGATGGT CGTCGCGCTG
CCGGTGTACT TCTACTTCCA GGCGAAGTCG GGTTTCGCCG GCTGGGGGCG TGATCTGAAG
GCGGCGTGGT GGCTGGTCGC TTATCTGCCG GTGATGGCGA TTCTGTCGCT GATCGGCAGC
AAGCAGTTCG GCGGCCACGA CCTGATCCCT TATGGCTGGG ACATGGTGGT GGTTATCGCG
TTTTCGCTGG TGTTCTATTA CTGGGGCGTG ACGAGCGGTT ATCGCTCGGA ATACCTGGAC
GAGCGCAGCG AGCATGACGA AGTGCTCGAA GGCATGGGCG CTCATTAA
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| Protein sequence | MFLLQLAWGG VSAKALTPAE TGEDVKSSIQ RNIGPFALML TGLGSIIGSG WLFGAWKAAK
IAGPAAVCAW VIGAVVILAI ALTYAELGAM FPESGGMVRY ARYSHGALVG FISAWANWIA
IVSVIPIEAE ASIQYMSTWP YPWAHALFVD GSLTTNGLLL SAALVIIYFM LNYWGVKLFA
RANSAITIFK FLIPGATILG LMFAGFHKEN FGEASTFAPY GWSAVLTAVS TSGIVFAFNG
FQSPINLAGE ARNPAKSVPF AVIGSILLAL VIYVLLQIAY IGAVNPSDVM KGWSHFNFAS
PFAELAIALN LNWLAILLYV DAFVSPSGTG TTYMATTSRM IYAMERNNTM PKMFGNVHPF
YGVPRQAMWF NLLVSFIFLF FFRGWSSLAA VISVATVISY LTGPISLMAL RRAATDLERP
LHIPGMKIIA PFAFVCASLI LYWAKWPLTG EIILLMVVAL PVYFYFQAKS GFAGWGRDLK
AAWWLVAYLP VMAILSLIGS KQFGGHDLIP YGWDMVVVIA FSLVFYYWGV TSGYRSEYLD
ERSEHDEVLE GMGAH
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