| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3520 |
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| Symbol | |
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| ID | 6282848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3965060 |
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| End bp | 3965770 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623099 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001897134 |
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| Protein GI | 187925492 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0476809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.130253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATCG CCCTTATCGA GCCGGACTTG CGACATGCTG AACTGATCGG CCGGCTGGTT
TTCGCCGGCG GTCATCTGTG CCAGCACTTC ACCGCGAGCG TGCCGTTTCT GGCGCGCGCC
GACGAAGAAT TCTTCGATCT TCTCATCACC GAAAGCTGGG CCGGCGACCA TCCCGCCGAA
GACGTCATTC CGCGCGCCCG CGCCATTCTG CCGGGCTTGC CGGTGATCGT GCTGATGTCG
GCGCCGCGCG AAAGCCAGAT TGTCGCCGCG CTTCACGCGG GCGCCGACGA CTGCCTGACC
AAACCGGTCC GCGGCCCCGA GATGCTGGCC CGCGTGGACG CGCTGCTGCG CCGCGCCGGC
TTGCGGCGGC CGCCTAACCG GCGGCGTGAC ATCATCCGCG AATATGCGTT CGATGCCGCG
CAATTTGCCG TCACGTTCCG TAAGCAAACG GTCGCGCTCA CGCCCAAGGA ATTCCGCCTC
GCGCTGCTGC TGTTCAGCAA TCTCTCACGG CCCGTGTCGC GAGCGCATAT TCTTGAAAAC
GTGTGGACGC GCCGCCGTGA CGTAAGGTCG CGCACGGTGG ACACGCACGC GTCGCGGGTG
CGCAGCAAAT TGCAGCTTCA TCCCGAACAC GGCTATTGTC TGACGCCGCT TTACGGCTAC
GGCTATCAAC TCGACGCGAT CCCGCCGGAA GCCGTTGTAA CCGCGGAATA A
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| Protein sequence | MRIALIEPDL RHAELIGRLV FAGGHLCQHF TASVPFLARA DEEFFDLLIT ESWAGDHPAE
DVIPRARAIL PGLPVIVLMS APRESQIVAA LHAGADDCLT KPVRGPEMLA RVDALLRRAG
LRRPPNRRRD IIREYAFDAA QFAVTFRKQT VALTPKEFRL ALLLFSNLSR PVSRAHILEN
VWTRRRDVRS RTVDTHASRV RSKLQLHPEH GYCLTPLYGY GYQLDAIPPE AVVTAE
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