| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3508 |
|---|
| Symbol | |
|---|
| ID | 6282188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3952827 |
|---|
| End bp | 3953804 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642623087 |
|---|
| Product | glycerophosphoryl diester phosphodiesterase |
|---|
| Protein accession | YP_001897122 |
|---|
| Protein GI | 187925480 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.898622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0223158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTC CTTCAGTGCG GTTGGCGGCA GGTAGCTGGA TGGCGGGCTT CGTTCTGGCC
GGTTGTTCAC TCACGCCCGT CATGAATACC GATGCCGTCA CGCAGGCGAA CTCATTGCCG
GCGATCATCG CGCATCGCGG CGGCACGGGC GATGCGCCGG AGAACACGCT CGATGCGATC
CACCTGTCGA TCGAGCATCG TGCCGACGCG ATGTGGCTGA CCGTGCAGCT GAGCAAGGAC
GGCGTGCCGG TTCTGTATCG GCCGGCCGAT CTGTCGGCAT TGACGGACGC GAAAGGGCCG
GTGTTCACCT ATACCGCCGC TGAGCTTGCC CGCGTCAATG CCGGCTGGAA TTTCCGCCGC
GCAGAGGCGT ATCCGTACCG CGATCATCCT GTGGGAATTC CGACGCTGCG CGAGGCGCTG
CATGCCACGC CTGCGACCAT GCCGGTCATC CTCGATATGA AAGCGCTGCC CGCCGGCCCG
CAGACGCAAG CCGTCGTGCG TGTGCTCGAT GAAGAAAACG CGTGGCAGCG TGTGTCGATC
TATTCGACCG AAGCGGATTA TCAACGGAGC TTTGCCGCGT ATCCGCAAGC GCGGCTGTTC
GAATCGCGCG ATGCGACGCG TGAGCGTCTC GTGCGAGTCC TGCTGAATCA GGGGTGCGTG
GACGCGCCGG CCGAACGCAC CATGACCGCG TTTGAGTTGC ATCGCGCGCT GACGGTGGTG
GAGAAGTTCA CGCTGGGGGA GGGGCGCTCG GATGTGCAGG CTACGCTATG GACGCCGGCA
ACGGTCGCTT GTTTCCGGCA GAAGCCGGGC GTGCGGATCG TCGCGATCGC GGTGAACGAG
GCGGACCATT ACCGTATGGC GGCGTGCCTC GGGCTCGATG CGGTGCTCGC GGATTCACCG
TCGAAAATGG CGGCCATCAG GGACGGTATC GCGTTGCCGT TGCGTTGTCC GCGTTCTAGG
GCAAGCAGTG GCCAATAA
|
|---|
| Protein sequence | MLSPSVRLAA GSWMAGFVLA GCSLTPVMNT DAVTQANSLP AIIAHRGGTG DAPENTLDAI
HLSIEHRADA MWLTVQLSKD GVPVLYRPAD LSALTDAKGP VFTYTAAELA RVNAGWNFRR
AEAYPYRDHP VGIPTLREAL HATPATMPVI LDMKALPAGP QTQAVVRVLD EENAWQRVSI
YSTEADYQRS FAAYPQARLF ESRDATRERL VRVLLNQGCV DAPAERTMTA FELHRALTVV
EKFTLGEGRS DVQATLWTPA TVACFRQKPG VRIVAIAVNE ADHYRMAACL GLDAVLADSP
SKMAAIRDGI ALPLRCPRSR ASSGQ
|
|---|
| |