| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3503 |
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| Symbol | |
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| ID | 6284488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3946941 |
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| End bp | 3948731 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623082 |
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| Product | peptidase M61 domain protein |
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| Protein accession | YP_001897117 |
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| Protein GI | 187925475 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.835737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00306179 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCGA TCCGCTACAC CATCGTTCCC AAGCAACCCG CCGCCCACCT GTTCGAAGTC
ACCGTGACCG TCGCCGATCC CGATCCGGCC GGCCAGCGTT TCATGCTGCC GGTGTGGATT
CCGGGCAGCT ACATGGTGCG CGAGTTCGCG CGCAACATCG TCACGCTGCG CGCCTTCAAC
GACGCGGGCC GCAAGGTGCG TGTCGAAAAG ACCGACAAGC ACACATGGCA AGCCGCGCCG
GTCAAGGGCG CGCTGACGCT GCGCTACGAG GTCTATGCAT GGGATCTGTC GGTGCGCGCG
GCGCATCTCG ACGATACGAC GGGCTTTTTC AACGGCACGA GCGTGTTTCT CTCGCCGCTC
GGTCACGAAG AGGCGCAGTG CGTGGTCGAC ATTCAGAAGC CCGAGGGCGC GGCGTATCGC
AACTGGCGTG TCGCGACCGC GTTGCCGGAA GCGCGTGGTA CGAAGCGGTA TGGCTTCGGC
GAGTATCGCG CGCAGAACTA CGACGAACTG ATCGATCATC CGGTCACACT CGGCGAATTC
GCACTAGCGA CGTTCAAGGC GCATGGCGTG CCGCACGACA TCGTGATCGC CGGGCGCGTG
GTTGGCCTGG ACATGGCGCG TCTGTCCGCC GACCTGAAGC GCATTTGCGA AGCGCAGATC
GCGTTGTTCG AGCCGAAGTC GAAGAAGGCG CCGGTTGATC GCTACGTGTT CATGACCCAA
GCCGTCACCG ATGGTTATGG CGGCCTCGAA CACCGCGCTT CGACCGCGCT GATCTGCAAT
CGCGGCGATC TGCCGGTGGA AGGCCGCGAG GCGCTTACCG AAGGCTATCG AACCTACCTC
GGCCTGTGCA GCCACGAATA TTTCCACACC TGGAACGTGA AGCGCATCAA GCCGGCGGTG
TTCGCGCCGT ACGATCTGAG CGTCGAAAAC TACACGTCGC TGCTGTGGCT GTTCGAGGGC
TTCACCTCTT ACTACGACGA CCTGATCCTC GTGCGCAGCG GCCTGATCTC GCAGGACGAC
TATTTCGGCA TGCTCGGCAA GGTGATCGGC GGCGTGCAGC GCGGTAGCGG GCGTCTCAAG
CAGACCGTCG CCGAAAGCTC GTTCGACGCG TGGGTCAAGT ACTACCGGCA GGACGAGAAC
GCGCCGAATG CGATCGTCAG CTATTACACC AAGGGCTCGC TCGTCGCGCT CGCGTTCGAT
CTGACGATCC GCGCGCAAAC CAATAACCGC AAATCCCTCG ACGACGTGAT GCGTTTGCTG
TGGCAGCGCT TTGGCCGCGA TTTTTATCGT GGCAAACCGG TCGGCGTCGA CGAAAACGAG
ATCGAGGCGC TTTTCGCGGA AGCGACCGGC GCGAAGCTGG CCGAGCTGTT TGCCGAAGCC
GTGCACGGCA CGCGCGATCT GCCGCTCGAC ACGCTGCTTG CGCCGTTCGG TGTCGACATC
GCGCCCGAAT TGGACAAAAA CGGCAAGCCG TCGCTCGGCG CGCGTGTGCG CGGCGGCGCG
GATTGCACGC TGGCGGCGGT TCATGACGGC AGCGCCGCGC AAAAAGCCGG ACTCTCGGCC
GGCGACGTGC TGATCGCGCT CGACGGCCTG CGCGTAACCG GCTCGAATCT TGACGGGCTG
CTCGCGCGCT ATCAGCCTGG CGCGAAAGTC GAGGTACACG CGTTCCGCCG CGACGAGCTG
CGCACCACGC AAGTCAAGCT GGATGGGCCC GAGGTGGCAC GCTACAAGCT CACCGCCAGC
GACAAGCGGC CCGCCGCGCG CAAGGCGCGT GAGCGCTGGC TGGCGAGCTG A
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| Protein sequence | MKPIRYTIVP KQPAAHLFEV TVTVADPDPA GQRFMLPVWI PGSYMVREFA RNIVTLRAFN
DAGRKVRVEK TDKHTWQAAP VKGALTLRYE VYAWDLSVRA AHLDDTTGFF NGTSVFLSPL
GHEEAQCVVD IQKPEGAAYR NWRVATALPE ARGTKRYGFG EYRAQNYDEL IDHPVTLGEF
ALATFKAHGV PHDIVIAGRV VGLDMARLSA DLKRICEAQI ALFEPKSKKA PVDRYVFMTQ
AVTDGYGGLE HRASTALICN RGDLPVEGRE ALTEGYRTYL GLCSHEYFHT WNVKRIKPAV
FAPYDLSVEN YTSLLWLFEG FTSYYDDLIL VRSGLISQDD YFGMLGKVIG GVQRGSGRLK
QTVAESSFDA WVKYYRQDEN APNAIVSYYT KGSLVALAFD LTIRAQTNNR KSLDDVMRLL
WQRFGRDFYR GKPVGVDENE IEALFAEATG AKLAELFAEA VHGTRDLPLD TLLAPFGVDI
APELDKNGKP SLGARVRGGA DCTLAAVHDG SAAQKAGLSA GDVLIALDGL RVTGSNLDGL
LARYQPGAKV EVHAFRRDEL RTTQVKLDGP EVARYKLTAS DKRPAARKAR ERWLAS
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