| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3498 |
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| Symbol | trpD |
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| ID | 6283321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3942593 |
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| End bp | 3943642 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623077 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001897112 |
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| Protein GI | 187925470 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.432784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000262957 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAGAG ACGACATCAT GACGATTACG CCCCAGGAAG CGCTGCAACG GACCATCGAG
CACCGCGAGA TTTTCCACGA CGAAATGCTG CATTTGATGC GGCTCATCAT GCGCGGCGAA
CTCTCGCCCG TGATGGCGGC CGCGATCATC ACCGGCTTGC GTGTCAAAAA AGAGACCATC
GGCGAAATCA CCGCCGCCGC CACGGTGATG CGCGAGTTTG CCCGGCACGT CGAGGTGCAG
GACAACTCGA ACTTCGTCGA TATCGTCGGC ACCGGCGGCG ACGGCTCGCA CACCTTCAAC
ATTTCCACGG CAACCATGTT CGTTTCGGCC GCGGCCGGCG CCAAGGTCGC GAAACACGGT
GGCCGCGGCG TATCGAGCAA GTCGGGCAGC GCGGACGTGC TCGAAGCGCT CGGCGTGAAT
ATCGATCTGC AGCCGGAACA GGTGGCGGCG TCGATTGCGG AAACCGGCAT GGGCTTCATG
TTCGCGCCGA ACCATCATCC GGCCATGAAG AACATTGCGC CGGTTCGCCG CGAACTCGGC
GTGCGGACCA TCTTCAATAT TCTCGGGCCG CTGACCAATC CGGCCGGCGC ACCGAATCAA
TTGATGGGCG TGTTCCACGG CGACCTCGTC GGCATTCAGG TGCGCGTGAT GCAACGTCTC
GGCGCGAAGC ACGTGCTAGT GGTGTACGGT ATGGACGGCA TGGACGAAGT CTCGCTCGGC
GCGGCGACGC AGGTCGGCGA GTTGCGCGAC GGCCAGATCC ACGAGTACGA GATTCATCCG
GAAGACTTCG GCATGCAGAT GGTGTCGAAC CGCACGCTGA AAGTGGCCGA CGCCACCGAA
TCCAAAGCGA TGCTGCTCGA CGCGCTCGAC AACAAGCCTG GCGTCGCCCG CGAAATCGTC
ACGCTGAACG CGGGCACCGC CTTGTATTCG GCGAACGTGG CTTCGTCGAT CGCGGACGGC
ATTCAGTTGG CGCGCGAAGC GATCGCGAGC GGCAAGGCAC GAGCCAAGGT GGACGAACTC
GTTCGCTTTA CCCAGCAATT CAAGCACTGA
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| Protein sequence | MKRDDIMTIT PQEALQRTIE HREIFHDEML HLMRLIMRGE LSPVMAAAII TGLRVKKETI
GEITAAATVM REFARHVEVQ DNSNFVDIVG TGGDGSHTFN ISTATMFVSA AAGAKVAKHG
GRGVSSKSGS ADVLEALGVN IDLQPEQVAA SIAETGMGFM FAPNHHPAMK NIAPVRRELG
VRTIFNILGP LTNPAGAPNQ LMGVFHGDLV GIQVRVMQRL GAKHVLVVYG MDGMDEVSLG
AATQVGELRD GQIHEYEIHP EDFGMQMVSN RTLKVADATE SKAMLLDALD NKPGVAREIV
TLNAGTALYS ANVASSIADG IQLAREAIAS GKARAKVDEL VRFTQQFKH
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