| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3495 |
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| Symbol | |
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| ID | 6283318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3939398 |
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| End bp | 3940114 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623074 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001897109 |
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| Protein GI | 187925467 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0294223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000911523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCTC CGTTCCCCAC CCCGACTTTC ACCGGCCCAC GCCTGCAAGC CGCGATCATC
GACCTCGACG GCACGATGAT CGATACCGCC GACGATTTCA CCGCCGGCCT GAACGGCATG
CTCGCGCAAC TCGACGCGGA AGAAACGTCG CGCGAAGAAG TGGTCGGTTA TGTCGGCAAG
GGTTCGGAGC ATCTGATCCG CAGCGTGCTG GCGCCGCGCT TCGAAACGGA ACGCGCGCAA
GACCGCTTCG ACGAAGCGCT CGCGATCTAT CAGGAGGAGT ACGCGAAGAT CAACGGCACG
CACACGCGGC TCTATCCCGA TGTCGAAGCC GGCCTGATCG CCATGCGCGA CGCCGGCCTC
AAGCTCGCCT GCGTGACCAA CAAGCCGCAT CGGTTCGCGG TGGAATTGCT GCAGCAGTAT
GGGCTTGCCC AGTATTTCAG CGTCGTGATC GGCGGCGACA GTCTGGCGAA AAAGAAGCCG
GATCCGCTGC CCATGCTCAC CGCGGCGGCG CAGTTGGGCG TGAAGCCGCA GGCCACGGTT
GCCATCGGCG ATTCGGAAAA CGACGCGCTG GCGGGCCGTG CGGCCGGCAT GGCGACGCTC
ACGGTGCCCT ACGGCTACAA CCACGGCCAA GCTATACAAA CAATAAAATC CGATGGTATA
GTTGGCTCGC TGCTCGACGC CGCCAAGGCG ATCGCAGCGC ACCAATCCAC GACCTGA
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| Protein sequence | MTAPFPTPTF TGPRLQAAII DLDGTMIDTA DDFTAGLNGM LAQLDAEETS REEVVGYVGK
GSEHLIRSVL APRFETERAQ DRFDEALAIY QEEYAKINGT HTRLYPDVEA GLIAMRDAGL
KLACVTNKPH RFAVELLQQY GLAQYFSVVI GGDSLAKKKP DPLPMLTAAA QLGVKPQATV
AIGDSENDAL AGRAAGMATL TVPYGYNHGQ AIQTIKSDGI VGSLLDAAKA IAAHQSTT
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