| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3487 |
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| Symbol | |
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| ID | 6282639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3932532 |
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| End bp | 3933734 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623066 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001897101 |
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| Protein GI | 187925459 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00319846 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000297737 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGACG CCTTCATTTG CGATGCGATT CGCACTCCAA TTGGCCGCTA TGGCGGCGCA
CTCAAGGATG TCCGCGCCGA CGACCTCGGC GCGGTGCCGA TCAAGGCGCT GATCGAACGC
AATCCTGGCG TCGACTGGCG CACTGTAGAC GATGTCATTT ATGGCTGCGC GAATCAGGCC
GGCGAAGACA ATCGCAACGT CGCCCGTATG TCGGCGTTGC TGGCCGGCTT GCCTGTTGAG
GCGCCCGGCT CAACCATCAA CCGCTTGTGC GGCTCGGGTA TGGACGCGGT CGGCACCGCC
GCGCGCGCGA TCAAGGCGGG CGAGGCGCGC CTGATGATCG CCGGCGGCGT CGAAAGCATG
ACACGCGCGC CGTTTGTCAT GGGCAAGGCG ACTAGTGCGT TCGCGCGCCA GGCTGATATC
TACGACACGA CCATCGGCTG GCGCTTCATC AACCCGCTGA TGAAACGCCA GTATGGCGTC
GATTCGATGC CTGAAACCGC GGAAAACGTC GCTGCCGAAT TCAGCGTCAG CCGCGCGGAT
CAGGACGCGT TCGCGCTGGC GAGCCAGCAA AAGGCCGCTC GCGCCCAGCA GGATGGCACG
CTGGCCCAAG AGATTGTCGG CGTCGAAATC GCGCAGAAAA AGGGCGACCC CGTGCGCGCG
CTGCTCGATG AGCACCCGCG CGAAACGTCG CTCGAAAGTT TGGGCAAGCT TAAAGGCGTG
GTTCGCCCGG ACGGCAGCGT GACGGCCGGC AATGCGTCGG GCGTGAACGA CGGCGCGTGC
GCGCTGTTGC TAGCCAACCA GCAGGCGGCC GATCAATACG GCCTGCGCCG CCGTGCCCGC
GTGGTGGGCA TGGCAACGGC GGGAGTCGAG CCGCGCATCA TGGGTATCGG TCCGGCGCCG
GCCACGCAAA AACTGTTGAA GCAACTCGGC ATGACGCTCG AACAACTCGA TGTGATCGAG
TTGAACGAAG CCTTCGCATC GCAAGGTCTC GCTGTTCTGC GTACGCTCGG TTTGCGCGAC
GACGACCCGC GCGTCAACCC GAACGGCGGA GCCATTGCAC TCGGCCATCC GCTGGGTGCT
TCGGGCGCGC GTCTGATCAC GACCGCGCTG TACCAATTGG AGCGGACCAA CGGCCGCTTT
GCGCTTTGCA CGATGTGCAT TGGCGTGGGC CAGGGCATTG CACTGGTCAT CGAGCGGCTC
TGA
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| Protein sequence | MNDAFICDAI RTPIGRYGGA LKDVRADDLG AVPIKALIER NPGVDWRTVD DVIYGCANQA
GEDNRNVARM SALLAGLPVE APGSTINRLC GSGMDAVGTA ARAIKAGEAR LMIAGGVESM
TRAPFVMGKA TSAFARQADI YDTTIGWRFI NPLMKRQYGV DSMPETAENV AAEFSVSRAD
QDAFALASQQ KAARAQQDGT LAQEIVGVEI AQKKGDPVRA LLDEHPRETS LESLGKLKGV
VRPDGSVTAG NASGVNDGAC ALLLANQQAA DQYGLRRRAR VVGMATAGVE PRIMGIGPAP
ATQKLLKQLG MTLEQLDVIE LNEAFASQGL AVLRTLGLRD DDPRVNPNGG AIALGHPLGA
SGARLITTAL YQLERTNGRF ALCTMCIGVG QGIALVIERL
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