| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3482 |
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| Symbol | |
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| ID | 6281247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3918430 |
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| End bp | 3920103 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623056 |
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| Product | Long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001897096 |
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| Protein GI | 187925454 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0194948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00229302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAAA TCTGGCTGAA ATCTTATCCG CCCGGCGTTC CCGCAGAGAT CGACCCGAGC
CGCTATTCGT CGGTGGGAGA ACTGCTCGAA GAAGCCTTCC GCGAGCACCG CGCCAAACCG
GCGTTCGTCT GCATGGGCAA GGAGATCAGC TACGGCGAGC TCGACGCGCT TTCGCGCAAA
CTCGCCGCGT GGTTTCAGTC GAAGGGCTTG GCCCGCGGCG CGCGCATCGC GATCATGATG
CCCAACGTGC TGCAGTATCC GGTGGCCATT GCAGCCATCT TGCGCGCGGG CTATGTGGTC
GTGAACGTGA ACCCGCTCTA TACGCCGCGT GAACTCGAGC ATCAACTCAA GGACAGCGGA
GCGGAGGCGA TCATTCTGCT CGAGAATTTC GCGGTTACGC TGCAGGCGAT CGTGCGCAAC
ACGTCGATCA AGCATGTGGT TGTGGCGGCA ATGGGCGACT TGATGGGGAT CAAGGGCACG
CTGGTGAATT TCGTCGTGCG CAAGGTGAAG AAGATGGTGC CGGCCTGGAG TCTGCCGGGG
CACGTCAAAT TCAACACCGC CATAGCAGAA GGCGCACGCC AGAATTTCAA GCCGGTCCAG
CAAGGCCCTG AAGACGTCGC ATTTCTCCAG TACACGGGCG GAACGACAGG TGTGGCCAAG
GGCGCAACGC TGCTGCATCG GAACCTGATC GCCAATGTGC TGCAGTCGGA GATCTGGCTC
GATCCGGTTC GCGCGAATCG CAAGGATATC GATCAGTTCG TCACCGTCGT CGCCTTGCCG
CTGTATCACG TGTTCGCGCT GACCGTGTGC GGGCTGCTGA CGATCCGCAC TGGTGGCCTC
GGCGTACTCA TTCCGAATCC GCGCGACATT CCCGGCATGA TCAAGGCGCT GGAAGGCTAT
CCGATCACGA CGATTCCCGC CGTCAACACG CTGTACAACG CGTTGTTGAA CAGCCCGGAT
TTCCATAAGC TCGATTTTTC GAAGCTGATC GCCGCGAACG GCGGAGGTAT GGCGGTGCAG
GAAGCCGTCG CCAAACGCTG GTACGAGCAG ACTCATACGC CGATTATCGA AGGATACGGT
TTGTCGGAGA CGTCGCCGTG CGTGACCTGC AATCCGGTCA CGGTCACCGA ATACAGCGGA
ACAATCGGCC TGCCGCTGCC GTCGACGGAA ATCTCGATTC GTGACGACGA AGGTAACGAG
GTGCCGCTCG GTCAGCCCGG CGAGATTTGC ATCCGCGGGC CGCAGGTGAT GGCAGGCTAC
TGGAACCGGC CCGACGAAAC CGCGAAAGTG ATGACGGCGG ACGGGTTCTT CAAATCGGGC
GATGTCGGCC TGATGAATGA CGGCGGCTTC GTCAAGATCG TCGACCGCAA GAAGGACATG
ATTCTGGTGT CCGGTTTCAA TGTCTATCCG AACGAAATCG AAGACGTGGT CGCCAAGCTA
CCGGGCGTGT TCGAGGTTGC AGCGGTCGGC GTGCCGGACC AGCATTCCGG CGAAGCGGTG
AAGCTGTTCG TGGTGAAGAA GGATCAGGCG CTCACCGATG CCGACATCTT CGCCTACTGC
AAGCAGCAGT TGACCGGCTA CAAGCGGCCT AAGATCGTCG AGTTCCGTAC CGAGCTGCCG
AAGAGCAATG TCGGCAAGAT TTTGCGTCGA GAGTTGCGCG ACGGACGGGC GTAG
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| Protein sequence | MDKIWLKSYP PGVPAEIDPS RYSSVGELLE EAFREHRAKP AFVCMGKEIS YGELDALSRK
LAAWFQSKGL ARGARIAIMM PNVLQYPVAI AAILRAGYVV VNVNPLYTPR ELEHQLKDSG
AEAIILLENF AVTLQAIVRN TSIKHVVVAA MGDLMGIKGT LVNFVVRKVK KMVPAWSLPG
HVKFNTAIAE GARQNFKPVQ QGPEDVAFLQ YTGGTTGVAK GATLLHRNLI ANVLQSEIWL
DPVRANRKDI DQFVTVVALP LYHVFALTVC GLLTIRTGGL GVLIPNPRDI PGMIKALEGY
PITTIPAVNT LYNALLNSPD FHKLDFSKLI AANGGGMAVQ EAVAKRWYEQ THTPIIEGYG
LSETSPCVTC NPVTVTEYSG TIGLPLPSTE ISIRDDEGNE VPLGQPGEIC IRGPQVMAGY
WNRPDETAKV MTADGFFKSG DVGLMNDGGF VKIVDRKKDM ILVSGFNVYP NEIEDVVAKL
PGVFEVAAVG VPDQHSGEAV KLFVVKKDQA LTDADIFAYC KQQLTGYKRP KIVEFRTELP
KSNVGKILRR ELRDGRA
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