| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3481 |
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| Symbol | |
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| ID | 6284320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3917068 |
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| End bp | 3918237 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642623055 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001897095 |
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| Protein GI | 187925453 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00201616 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00388153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGT CGCTTCTCGC TCTCGCAGCA CTGGGCGCAT TCGCAGGCGT CGCACATGCT
CAGAGCAGCG TGACCCTGTA CGGTATCATT GACGAAGGCT TCAACATCAA CACCAACTCG
GGTGGCAAGC ACCTGTACAA CCTGTCCAGC GGCGTTCTGC AAGGCTCGCG TTTCGGCCTG
CGCGGCACGG AAGATCTGGG CGGCGGTCTG AAGGCAATCT TCGTGTTGGA AAACGGCTTT
GACGTGAACA ACGGCAAGCT GGGTCAAGGC GGCCTGATGT TCGGTCGTCA AGCTTACGTC
GGCCTGTCGA GCCAATTCGG TACGGTCACG CTGGGTCGTC AGTACGACTC CGTCGTCGAC
TACGTCGGTC CGCTGGAAGC CGGCGACCAG TGGGGCGGCT ACATCGCTGC TCACCCGGGC
GACATCGACA ACTTCAACAA CGCGTACCGC ACCAACAACA CGGTCAAGTA CACGAGCGCA
AACTACGGCG GCCTGACGTT CGGCGGCACG TACAGCTTCG GCGGCATCGC CGGCAACGTC
ACGTCGAACC AGATCTGGTC GTTGGGCGCT GGCTACAACA ACGGTCCGTT GGTCTTGGGC
GTTGGCTACT TGAACGCACG CACGCCGGCA GCTGCGGGCG GCCTGTTCAA CACCGGCAGC
ACGGCTGCAG CACCGGCCGC AGCTGTGACG TCGCCGATCT ACGCTGGCTT CACGTCGGCT
AACACGTACC AAGTGATCGG TGCAGGCGGC GCGTACACGT TCGGCGCAGC GACCATCGGT
GCAACGTACT CGAACATCCG CTTCGGCAAC CTGGGCGCAT CGTATGCATC GCCGTTCAAG
GGCCAGTCGG CAACGTTCAA CAACGCAGAA CTGAACTTCA AGTATCAGTT GACCCCGGCA
TTGCTGGTCG GCGCAGCGTA TGACTACACG CGCGGCGCGG AAATCAACGG CAACTCGCGT
GCTCAGTACC ACCAAGGCGC AGTTGGCGTG GACTACTTCC TGTCCAAGCG TACCGACGTG
TACGTGACGG GTGTGTACCA ACACGCTCTG GGCGACACGG TCACCGCTGG TGGCGCTGTG
GTCGACGCAA CGGCAGGCAT CAACGGCCTG TCGGGTTCGT CGAACCAGAA CCAGTTCACG
GCGCGCATCG GTATCCGCCA CAAGTTCTAA
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| Protein sequence | MKKSLLALAA LGAFAGVAHA QSSVTLYGII DEGFNINTNS GGKHLYNLSS GVLQGSRFGL
RGTEDLGGGL KAIFVLENGF DVNNGKLGQG GLMFGRQAYV GLSSQFGTVT LGRQYDSVVD
YVGPLEAGDQ WGGYIAAHPG DIDNFNNAYR TNNTVKYTSA NYGGLTFGGT YSFGGIAGNV
TSNQIWSLGA GYNNGPLVLG VGYLNARTPA AAGGLFNTGS TAAAPAAAVT SPIYAGFTSA
NTYQVIGAGG AYTFGAATIG ATYSNIRFGN LGASYASPFK GQSATFNNAE LNFKYQLTPA
LLVGAAYDYT RGAEINGNSR AQYHQGAVGV DYFLSKRTDV YVTGVYQHAL GDTVTAGGAV
VDATAGINGL SGSSNQNQFT ARIGIRHKF
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