Gene Bphyt_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3473 
SymbolmraY 
ID6282832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3907952 
End bp3909121 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content60% 
IMG OID642623047 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001897087 
Protein GI187925445 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.400382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0148829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTGG CGCTGGCGCA ATGGCTGCAG AATGACGCAA GCTTCTTGCG CGTGTTCAGT 
TATCTGACTT TCCGTGCGGT GATGGCGACC ATCACCGCGC TGCTGATCGG GCTCGTCTGC
GGCCCGGCGG TGATTCGCAA GCTGACCGCC ATGAAGGTCG GTCAGGCCGT TCGTAAAGAC
GGCCCGCAAA CGCACCTCGT CAAATCGGGC ACGCCGACCA TGGGTGGTGT GCTGATTCTG
CTCGGCATCG CCGTGGCTAC TTTGTTGTGG GCCGATCTGA CCAATCGCTT CATCTGGATC
GTGATGCTCG TCACGTTCGG TTTCGGCGTG ATCGGCTGGG TCGACGATTA CCGCAAGGTG
GTCTACAAGG ACCCGCGCGG CATGTCGTCG CGTGAAAAGT ATTTCTGGCA GTCGGTGATC
GGGCTGTTCG CGGCAGTTTA TCTGGCCTTC AGTGTGTCCG AAGCGAGCAA TGTGCGCGTG
TTCGACCTGT TCATGGCGTG GGTGAGGAGC GGCCTCTCGA TGGGCTTGCC GCCGCACGCC
GATTTGATGC TGCCGTTCGT CAAGTCGATC AGCTATCCGC TCGGCGTGTG GGGCTTCATC
GTGTTGACGT ATCTGGTGAT CGTCGGCGCG AGCAACGCGG TCAACCTCAC TGATGGCCTC
GACGGCCTCG TGATCATGCC GGTCGTGCTG GTCGGCGCGT CGCTCGGCGT GTTCGCTTAC
GTGATGGGCA GCTCGGTCTA TTCGAAGTAT CTGCTGTTTC CGCATATCGC CGGCGCGGGT
GAACTGCTGA TCTTCTGTTC GGCGATGGGC GGGGCAGGGC TCGCGTTCCT CTGGTTCAAC
ACGCACCCGG CGCAGATGTT CATGGGCGAC GTCGGCGCGC TCGCGCTCGG TGGCGCGCTC
GGCACGGTAG CGGTGATCGT GCGTCAGGAA ATCGTGCTCT TCATCATGGG CGGCATTTTC
GTCGCTGAGA CGCTTTCCGT GATGTTGCAG GTCACCTGGT TCAAGTTCAC CAAGCGCCGT
TTCGGCGAAG GGCGGCGTCT CTTCAAGATG GCGCCGCTGC ATCACCATTT CGAGTTGTCG
GGGTGGAAAG AAACGCAGGT GGTCGTGCGC TTCTGGATCA TCACGTTGAT GTTGTGTCTC
TTTGGTTTGT CCACGCTCAA ACTGCGTTAA
 
Protein sequence
MLLALAQWLQ NDASFLRVFS YLTFRAVMAT ITALLIGLVC GPAVIRKLTA MKVGQAVRKD 
GPQTHLVKSG TPTMGGVLIL LGIAVATLLW ADLTNRFIWI VMLVTFGFGV IGWVDDYRKV
VYKDPRGMSS REKYFWQSVI GLFAAVYLAF SVSEASNVRV FDLFMAWVRS GLSMGLPPHA
DLMLPFVKSI SYPLGVWGFI VLTYLVIVGA SNAVNLTDGL DGLVIMPVVL VGASLGVFAY
VMGSSVYSKY LLFPHIAGAG ELLIFCSAMG GAGLAFLWFN THPAQMFMGD VGALALGGAL
GTVAVIVRQE IVLFIMGGIF VAETLSVMLQ VTWFKFTKRR FGEGRRLFKM APLHHHFELS
GWKETQVVVR FWIITLMLCL FGLSTLKLR