Gene Bphyt_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3463 
SymbollpxC 
ID6280854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3896303 
End bp3897220 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID642623037 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_001897077 
Protein GI187925435 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0003199 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000399265 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAAGC AGCGCACTAT CAAACAAATC GTCAAGACGG TCGGCATCGG CCTGCACTCG 
GGCCGCAAAG TCGAACTGAC GCTCCGTCCG GCCGCGCCGG ACACGGGCAT CGTGTTTTCG
CGCGTGGATC TGGCCACGCC GGTGGACATT CCCGCGTCGG CGATGGCGAT TGGCGATACG
CGTATGGCTT CCGTGTTGCA GAAGGACGGC GCGCGCGTCT CGACCATCGA GCATCTGATG
TCCGCCTGCG CCGGTCTCGG CATCGACAAT CTTTATATCG ACGTCACCGC CGAAGAAATT
CCGATCATGG ACGGCAGCGC CGGTTCATTC GTATTTCTGA TTCAGTCTGC CGGTATTGAA
GAGCAGAACG CGGCGAAGAA ATTCATCAAG GTCACCAAGC CGGTCGAAAT TCGCGACGGC
GATAAATTCG CGCGCCTCGA CCCGTATTTT GGTTTCAAGC TCAAATTTAC GATCGATTTC
CGTCACCCGG CTGTGGATAA AACCGGTCAG GCGCTGGAAG TGGATTTTGC CAATACGTCG
TACGTGCGCG AGATCGCGCG TGCTCGCACC TTCGGTTTTG CGCATGAGGT GGAAATGATG
CGCGAACTGG GTCTGGCGCG TGGCGGCAGC ATGGACAACG CGATCGTGCT GGACGAATAC
CGCATTCTGA ACAACGACGG CCTGCGCTAC GACGACGAGT TCGTGAAGCA CAAGATGCTC
GACGCGATCG GCGACCTGTA TGTGATCGGC CATCCGCTGC TGGCAGCGTA CGACGCGTAC
AAATCGGGCC ACGGCCTGAA CAACGCGCTG CTGCGCGAAC TGCTGGCGCA CGAAGATTCG
TACGAAATCG TCACCTTCGA CGACACGCAA AAGGCGCCGC GCGGTTTTGC CTACGAGACG
CAGACGGCTT TTGCCTAA
 
Protein sequence
MLKQRTIKQI VKTVGIGLHS GRKVELTLRP AAPDTGIVFS RVDLATPVDI PASAMAIGDT 
RMASVLQKDG ARVSTIEHLM SACAGLGIDN LYIDVTAEEI PIMDGSAGSF VFLIQSAGIE
EQNAAKKFIK VTKPVEIRDG DKFARLDPYF GFKLKFTIDF RHPAVDKTGQ ALEVDFANTS
YVREIARART FGFAHEVEMM RELGLARGGS MDNAIVLDEY RILNNDGLRY DDEFVKHKML
DAIGDLYVIG HPLLAAYDAY KSGHGLNNAL LRELLAHEDS YEIVTFDDTQ KAPRGFAYET
QTAFA