Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3459 |
Symbol | |
ID | 6284769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3890330 |
End bp | 3891220 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642623033 |
Product | protein of unknown function DUF815 |
Protein accession | YP_001897073 |
Protein GI | 187925431 |
COG category | [R] General function prediction only |
COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.394116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000152293 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGCTT ACTTTCCAGC CATGGATAAA CTCGAACAGT TTCTGACCCG GGCCGAAGCC GTGCTCGTTC GCCTCGAAGC GATGCTTCCG CCTGCTGCGC CTGATATCGA CTGGTCGGCG GCAGTGGCCT TCCGCTGGCG CAAACGCCAG GGGCGCGGCT ACCTGCAGCC GGTGCCGGCC ATCTCGGCGA TCACGCTTGA CGACCTGCAG AACATCGATC GCCAGAAAGG CCTGATCGAG CAGAACACGC GTCAATTCGT GCACAAGCAG CCGGCCAACA ACGTCTTGCT GACGGGCGCG CGCGGCACCG GCAAGTCGTC GCTGATCAAG GCGTGTCTGA ACGCGTATGC CAAAGACGGC CTGCGTCTGA TCGAAGTGGA TAAGGACGAT CTGCACGACC TCGGCGATAT CGTCGACCTG ATTGCGCAGC GGCCGGAGCG CTTTGTGGTG TTCTGCGACG ACCTCTCGTT CGAAGACGGC GAGTCGGGCT ACAAGGCGCT GAAGGTTGCG CTCGACGGCT CGATCGCCGC GCAATCGGAC AACGTGCTGA TCTACGCGAC GTCGAACCGC CGCCATCTGT TGCCCGAATA CATGAGCGAC AACGAGACGT ACAAGCACAC GTCCGACGGC GAGATTCACC CTGGCGAACT GGTCGAAGAA AAGATCTCCC TGTCCGAGCG CTTCGGGCTG TGGGTCAGCT TCTATCCGTT CAAACAGGAC GACTACCTGT CGATCATCGG CCACTGGCTG CGCCATTTCG GCTGCGATGA CGCCGAAGTC GAAGCGGCAC GCGGCGATGC GCTGGTGTGG GCGCTCGAGC GCGGGTCGCG TTCAGGACGT GTCGCGTGGC AATTCGCGCG CGACTGGTCC GGCCGCAAAA CCTCAGCGTG A
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Protein sequence | MAAYFPAMDK LEQFLTRAEA VLVRLEAMLP PAAPDIDWSA AVAFRWRKRQ GRGYLQPVPA ISAITLDDLQ NIDRQKGLIE QNTRQFVHKQ PANNVLLTGA RGTGKSSLIK ACLNAYAKDG LRLIEVDKDD LHDLGDIVDL IAQRPERFVV FCDDLSFEDG ESGYKALKVA LDGSIAAQSD NVLIYATSNR RHLLPEYMSD NETYKHTSDG EIHPGELVEE KISLSERFGL WVSFYPFKQD DYLSIIGHWL RHFGCDDAEV EAARGDALVW ALERGSRSGR VAWQFARDWS GRKTSA
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