Gene Bphyt_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3459 
Symbol 
ID6284769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3890330 
End bp3891220 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID642623033 
Productprotein of unknown function DUF815 
Protein accessionYP_001897073 
Protein GI187925431 
COG category[R] General function prediction only 
COG ID[COG2607] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.394116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000152293 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGCTT ACTTTCCAGC CATGGATAAA CTCGAACAGT TTCTGACCCG GGCCGAAGCC 
GTGCTCGTTC GCCTCGAAGC GATGCTTCCG CCTGCTGCGC CTGATATCGA CTGGTCGGCG
GCAGTGGCCT TCCGCTGGCG CAAACGCCAG GGGCGCGGCT ACCTGCAGCC GGTGCCGGCC
ATCTCGGCGA TCACGCTTGA CGACCTGCAG AACATCGATC GCCAGAAAGG CCTGATCGAG
CAGAACACGC GTCAATTCGT GCACAAGCAG CCGGCCAACA ACGTCTTGCT GACGGGCGCG
CGCGGCACCG GCAAGTCGTC GCTGATCAAG GCGTGTCTGA ACGCGTATGC CAAAGACGGC
CTGCGTCTGA TCGAAGTGGA TAAGGACGAT CTGCACGACC TCGGCGATAT CGTCGACCTG
ATTGCGCAGC GGCCGGAGCG CTTTGTGGTG TTCTGCGACG ACCTCTCGTT CGAAGACGGC
GAGTCGGGCT ACAAGGCGCT GAAGGTTGCG CTCGACGGCT CGATCGCCGC GCAATCGGAC
AACGTGCTGA TCTACGCGAC GTCGAACCGC CGCCATCTGT TGCCCGAATA CATGAGCGAC
AACGAGACGT ACAAGCACAC GTCCGACGGC GAGATTCACC CTGGCGAACT GGTCGAAGAA
AAGATCTCCC TGTCCGAGCG CTTCGGGCTG TGGGTCAGCT TCTATCCGTT CAAACAGGAC
GACTACCTGT CGATCATCGG CCACTGGCTG CGCCATTTCG GCTGCGATGA CGCCGAAGTC
GAAGCGGCAC GCGGCGATGC GCTGGTGTGG GCGCTCGAGC GCGGGTCGCG TTCAGGACGT
GTCGCGTGGC AATTCGCGCG CGACTGGTCC GGCCGCAAAA CCTCAGCGTG A
 
Protein sequence
MAAYFPAMDK LEQFLTRAEA VLVRLEAMLP PAAPDIDWSA AVAFRWRKRQ GRGYLQPVPA 
ISAITLDDLQ NIDRQKGLIE QNTRQFVHKQ PANNVLLTGA RGTGKSSLIK ACLNAYAKDG
LRLIEVDKDD LHDLGDIVDL IAQRPERFVV FCDDLSFEDG ESGYKALKVA LDGSIAAQSD
NVLIYATSNR RHLLPEYMSD NETYKHTSDG EIHPGELVEE KISLSERFGL WVSFYPFKQD
DYLSIIGHWL RHFGCDDAEV EAARGDALVW ALERGSRSGR VAWQFARDWS GRKTSA