Gene Bphyt_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3456 
Symbol 
ID6284766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3888738 
End bp3889493 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content60% 
IMG OID642623030 
Producthypothetical protein 
Protein accessionYP_001897070 
Protein GI187925428 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.248464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00159769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGATCCTTT ACGAGTATCC CTTCAACGAG CGAATCCGGA CGCTATTGCG CCTCGAAGAT 
CTGTTCGAGC GCTTCACGTT CTTTCTGACT CAGGAAGACG CCAGGGAACA TCACGTCGCA
CTGACAACGT TGTTCGAAAT TTCAGAGGTT GCGGGCCGCG CGGATCTGAA GTCGGATCTG
ATGAAAGAAC TCGAACGCCA ACGGCAAACA CTGGCGCCGT TTCGCGGCAA TCCGGGAATC
GAACAGAGTG CGCTCGAGGC CGTACTTGGC GAGATCGAGC AAACGCTCGC GGGGCTTTCG
CAGATGCAGG GCAAGACCGG CCAGCATCTT GCCGACAACG AGTGGCTCGC CAGTATCCGC
AGCCGCGCGA TCATTCCAGG CGGCACCTGC AAGTTCGATT TGCCGTCCTA TTACGCCTGG
CAGCAGATTC ATCCTGATCA GCGCCGCCAG GACATCGCCA AGTGGGTGAC GCCGCTGCTG
CCGCTACGCG ACGCGGCCAT CATCGTCTTG CGGCTCGCGC GCGAGTCCGG CCAGGCATCC
AAGGTCATGG CCATGCAGGG CAGCTATCAG CAGATGCTGT CCGGCCGTTC GTATCAATTG
ATGCAAGTGC GGGTGGCACC GGAATTGCGC GTGATCCCAG AGGCCAGTGC GAACAAGTAC
ATGCTGTGGG TGCGCTTCAC GGTGCAGGAC GGCGATTTGC GTCCGCGTGC GGTCGATGTC
GACGTACCTT TCCAGCTCAC GCTTTGCAGC CTGTAA
 
Protein sequence
MILYEYPFNE RIRTLLRLED LFERFTFFLT QEDAREHHVA LTTLFEISEV AGRADLKSDL 
MKELERQRQT LAPFRGNPGI EQSALEAVLG EIEQTLAGLS QMQGKTGQHL ADNEWLASIR
SRAIIPGGTC KFDLPSYYAW QQIHPDQRRQ DIAKWVTPLL PLRDAAIIVL RLARESGQAS
KVMAMQGSYQ QMLSGRSYQL MQVRVAPELR VIPEASANKY MLWVRFTVQD GDLRPRAVDV
DVPFQLTLCS L