Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3456 |
Symbol | |
ID | 6284766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3888738 |
End bp | 3889493 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642623030 |
Product | hypothetical protein |
Protein accession | YP_001897070 |
Protein GI | 187925428 |
COG category | [S] Function unknown |
COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.248464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00159769 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGATCCTTT ACGAGTATCC CTTCAACGAG CGAATCCGGA CGCTATTGCG CCTCGAAGAT CTGTTCGAGC GCTTCACGTT CTTTCTGACT CAGGAAGACG CCAGGGAACA TCACGTCGCA CTGACAACGT TGTTCGAAAT TTCAGAGGTT GCGGGCCGCG CGGATCTGAA GTCGGATCTG ATGAAAGAAC TCGAACGCCA ACGGCAAACA CTGGCGCCGT TTCGCGGCAA TCCGGGAATC GAACAGAGTG CGCTCGAGGC CGTACTTGGC GAGATCGAGC AAACGCTCGC GGGGCTTTCG CAGATGCAGG GCAAGACCGG CCAGCATCTT GCCGACAACG AGTGGCTCGC CAGTATCCGC AGCCGCGCGA TCATTCCAGG CGGCACCTGC AAGTTCGATT TGCCGTCCTA TTACGCCTGG CAGCAGATTC ATCCTGATCA GCGCCGCCAG GACATCGCCA AGTGGGTGAC GCCGCTGCTG CCGCTACGCG ACGCGGCCAT CATCGTCTTG CGGCTCGCGC GCGAGTCCGG CCAGGCATCC AAGGTCATGG CCATGCAGGG CAGCTATCAG CAGATGCTGT CCGGCCGTTC GTATCAATTG ATGCAAGTGC GGGTGGCACC GGAATTGCGC GTGATCCCAG AGGCCAGTGC GAACAAGTAC ATGCTGTGGG TGCGCTTCAC GGTGCAGGAC GGCGATTTGC GTCCGCGTGC GGTCGATGTC GACGTACCTT TCCAGCTCAC GCTTTGCAGC CTGTAA
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Protein sequence | MILYEYPFNE RIRTLLRLED LFERFTFFLT QEDAREHHVA LTTLFEISEV AGRADLKSDL MKELERQRQT LAPFRGNPGI EQSALEAVLG EIEQTLAGLS QMQGKTGQHL ADNEWLASIR SRAIIPGGTC KFDLPSYYAW QQIHPDQRRQ DIAKWVTPLL PLRDAAIIVL RLARESGQAS KVMAMQGSYQ QMLSGRSYQL MQVRVAPELR VIPEASANKY MLWVRFTVQD GDLRPRAVDV DVPFQLTLCS L
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