| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3454 |
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| Symbol | |
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| ID | 6281924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3887017 |
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| End bp | 3887937 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642623028 |
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| Product | Prepilin peptidase |
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| Protein accession | YP_001897068 |
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| Protein GI | 187925426 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0110375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0033362 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCAGACA CCTCTTCCAG CCTGCTCTCG GGCTTGCTGC CCGACCATTT CGCGGCCGGC
CTCGGCCAGG CGTTCGGCAG CCTGCCCGCA GCATTGCAGA TGACGTTCGC CATTGTGTTC
GGCCTCGTGA TCGGCAGCTT CCTGAACGTG GTCGTGCATC GGCTGCCGAT CATGCTCGAT
CGCGCCTGGC GCGCTGAAGT CAGCGAGGCG GCCGATCAAC CACAGGAAGA AGACGGCTTG
CCGGCACGCT ACAACCTGTG GGTGCCGCGC AGTGCGTGTC CTCATTGCGG CCACGTGTTG
AGCGCATGGG AGAACCTGCC GGTACTGAGC TATCTATTGC TGCGCGGCCG CTGCTCCGCG
TGCAAGGCGC GCGTGAGCCT GCGCTATCCG CTGCTCGAAA TCGCCAGCGC AGCGTTTGCG
GCCGGCGCAC TCGCGATGTT CGGCCCGACC TTCACGGCGC TCGCCGCCTT TGGTCTGTGC
GCTACGCTGC TCGCCATGAG CGCGATCGAC ATCGACACGC ATCTGCTTCC CGACTCCATG
ACGCTGCCGT TGCTGTGGGC GGGCATCATC GTCAACTTCA ACGGTATGTT TACGAACCTG
CATGATGCGG TGCTCGGCGC AATCTTCGGC TATCTGGTGC TGTGGGTCGT GCATTGGGTA
TTTCTACTCA TACGCGGCGT CGAAGGCATG GGTCATGGTG ATTTCAAACT ACTGGCGGCG
CTCGGCGCGT GGCTCGGCTG GGCCGCGCTG CCGCAGATCG TGGTGGTCGC CGCGGTGACC
GGCGCGGTCG TCGGTCTGCT GGCAACATGG CGCGGCCGTA TGCGCTTCGA AGAGCCGCTG
CCTTTCGGGC CGTTTCTTGC CGCGGGCGGC GCACTGACGC TGTTTCTCGG CACACCGCTC
TATCTGGCTC TGGGAGGCTG A
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| Protein sequence | MPDTSSSLLS GLLPDHFAAG LGQAFGSLPA ALQMTFAIVF GLVIGSFLNV VVHRLPIMLD
RAWRAEVSEA ADQPQEEDGL PARYNLWVPR SACPHCGHVL SAWENLPVLS YLLLRGRCSA
CKARVSLRYP LLEIASAAFA AGALAMFGPT FTALAAFGLC ATLLAMSAID IDTHLLPDSM
TLPLLWAGII VNFNGMFTNL HDAVLGAIFG YLVLWVVHWV FLLIRGVEGM GHGDFKLLAA
LGAWLGWAAL PQIVVVAAVT GAVVGLLATW RGRMRFEEPL PFGPFLAAGG ALTLFLGTPL
YLALGG
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