| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3450 |
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| Symbol | |
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| ID | 6281919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3881581 |
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| End bp | 3882573 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623023 |
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| Product | Polyprenyl synthetase |
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| Protein accession | YP_001897064 |
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| Protein GI | 187925422 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.024256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00543361 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGTCGA CTGCCACCCC CTCCTCCAAC GCCGCCAGCC TGCTCGCTCC GATCGCCGAA
GACATGCAGC AGGTCAATCG CGTCATACGG CACCGTCTCG CGTCCGACGT GATGCTGATC
AACCAGATTT CCGAGTACAT CATCAGCGCC GGCGGCAAAC GGCTGCGGCC CGCGCTGCTG
CTGCTGGTGG CGGGCGCGCT GGGCGAAACC ACGGGGCACC GGCACGAGCT GGCCGCGGTC
GTCGAGTTCA TCCATACGGC CACCCTGCTG CACGACGACG TGGTCGACGA ATCCGACCTG
CGGCGCGGCC GTCAGACCGC CAACGCGCTG TTCGGCAACG CCGCGAGCGT GCTGGTGGGC
GACTTCCTGT ACTCGCGCTC GTTCCAGATG ATGGTCGGTG TGGGCAAAAT GCGGGTGATG
GAGATTCTGT CGGAAGCGAC CAACATCATC TCCGAGGGAG AGGTGCTGCA GCTCCTGAAC
ATGCACGACG CCGACGTGGA CGAAGCCCGC TACATGCAGG TGATCCGCTA CAAAACCGCC
AAGCTGTTCG AAGCAGCCGC CCAACTGGGC GCGGTGCTGG CCGGATCGGA CGCGAAAACG
GAAGCCGCCG CGGCAGAATT CGGCCGGCGC ATCGGCACCG CGTTCCAGAT CATGGACGAC
TGGCTCGACT ACACCGGCAC GGCTGAATCG ATGGGCAAGA ACGCCGGCGA CGACCTTCGC
GAGGGCAAAC CCACGCTGCC GCTGATCTAT CTGATCGAAC GCGGCACGCC GGAGCAATCG
GCGCTTGCGC GTGAAGTTAT CGAGCAAGGC GGAACGGACC GTTTCGACAC TATTTTCGAA
GCGATCACGC GCTCCGGCGC GTTGGACCAC ACGCTCGAAT GCGCGAAAAA GGAAGCTCAG
GCCGCGGCAG CAGCAATTTC TTCATTTCCG GATTCCATTT TTAAAGAGAG CCTGCTAGAA
TTATGTTCTT ACTCGACGGC AAGACAGTCT TGA
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| Protein sequence | MSSTATPSSN AASLLAPIAE DMQQVNRVIR HRLASDVMLI NQISEYIISA GGKRLRPALL
LLVAGALGET TGHRHELAAV VEFIHTATLL HDDVVDESDL RRGRQTANAL FGNAASVLVG
DFLYSRSFQM MVGVGKMRVM EILSEATNII SEGEVLQLLN MHDADVDEAR YMQVIRYKTA
KLFEAAAQLG AVLAGSDAKT EAAAAEFGRR IGTAFQIMDD WLDYTGTAES MGKNAGDDLR
EGKPTLPLIY LIERGTPEQS ALAREVIEQG GTDRFDTIFE AITRSGALDH TLECAKKEAQ
AAAAAISSFP DSIFKESLLE LCSYSTARQS
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