Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3444 |
Symbol | |
ID | 6283950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3876715 |
End bp | 3877455 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642623017 |
Product | NUDIX hydrolase |
Protein accession | YP_001897058 |
Protein GI | 187925416 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00155901 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00236834 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGATC GTGAAGGCTT TCGCCCGAAC GTCGGCATCA TCCTCTTGAA CGCGCACAAC GAGGTGTTTT GGGGCAAACG GCTCCGTGAA CATTCCTGGC AGTTTCCGCA AGGGGGCATC AAGTACGGAG AGACCCCCGT GCAAGCGATG TATCGGGAGT TACACGAAGA AACCGGGCTG CTTCCTGAGC ACGTCAAGGT GATTGGTCGC ACGCGCGACT GGTTGCGTTA CGAGGTGCCT GACAAGTTCA TCAAGCGCGA AGTACGCGGT CATTACCGCG GCCAGAAACA AATCTGGTTT TTGCTCCGGA TGGTTGGACG CGACTGCGAC ATCTGCTTGC GCGCCACCGA CCACCCTGAG TTCGATGCGT GGCGCTGGAA CGAGTACTGG GTGCCGCTCG ACTGTGTGAT CGAGTTCAAG CGGGATGTAT ATCAGTTGGC GCTGACGGAG CTATCCCGTT TCATGCGCCG GGCTGCGCCG CGTGCGGAAA AACCTGGCGG GCATCATGGG CCGCGCTATC CCCGGATAGC GTCGTCAATG GAAAGTCCGC CGGATTCCAC GGTAATGACG GTGACTTCAG TGACCACCGT CAGCATCGAA ACATCGGTTC ACGTAACGAT CGCGTCCGAT TGCGGTCCGG GGTCCGCGTC AACGGCAGAA GTCGACGCCG CGCCGGATCA CGAAGACGAA TCGGCAGGCG AAACGGCCGG CTCGCTGTTC CGCCCGGGCG TGCGCAATTA A
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Protein sequence | MLDREGFRPN VGIILLNAHN EVFWGKRLRE HSWQFPQGGI KYGETPVQAM YRELHEETGL LPEHVKVIGR TRDWLRYEVP DKFIKREVRG HYRGQKQIWF LLRMVGRDCD ICLRATDHPE FDAWRWNEYW VPLDCVIEFK RDVYQLALTE LSRFMRRAAP RAEKPGGHHG PRYPRIASSM ESPPDSTVMT VTSVTTVSIE TSVHVTIASD CGPGSASTAE VDAAPDHEDE SAGETAGSLF RPGVRN
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