Gene Bphyt_3444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3444 
Symbol 
ID6283950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3876715 
End bp3877455 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content60% 
IMG OID642623017 
ProductNUDIX hydrolase 
Protein accessionYP_001897058 
Protein GI187925416 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00155901 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00236834 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGATC GTGAAGGCTT TCGCCCGAAC GTCGGCATCA TCCTCTTGAA CGCGCACAAC 
GAGGTGTTTT GGGGCAAACG GCTCCGTGAA CATTCCTGGC AGTTTCCGCA AGGGGGCATC
AAGTACGGAG AGACCCCCGT GCAAGCGATG TATCGGGAGT TACACGAAGA AACCGGGCTG
CTTCCTGAGC ACGTCAAGGT GATTGGTCGC ACGCGCGACT GGTTGCGTTA CGAGGTGCCT
GACAAGTTCA TCAAGCGCGA AGTACGCGGT CATTACCGCG GCCAGAAACA AATCTGGTTT
TTGCTCCGGA TGGTTGGACG CGACTGCGAC ATCTGCTTGC GCGCCACCGA CCACCCTGAG
TTCGATGCGT GGCGCTGGAA CGAGTACTGG GTGCCGCTCG ACTGTGTGAT CGAGTTCAAG
CGGGATGTAT ATCAGTTGGC GCTGACGGAG CTATCCCGTT TCATGCGCCG GGCTGCGCCG
CGTGCGGAAA AACCTGGCGG GCATCATGGG CCGCGCTATC CCCGGATAGC GTCGTCAATG
GAAAGTCCGC CGGATTCCAC GGTAATGACG GTGACTTCAG TGACCACCGT CAGCATCGAA
ACATCGGTTC ACGTAACGAT CGCGTCCGAT TGCGGTCCGG GGTCCGCGTC AACGGCAGAA
GTCGACGCCG CGCCGGATCA CGAAGACGAA TCGGCAGGCG AAACGGCCGG CTCGCTGTTC
CGCCCGGGCG TGCGCAATTA A
 
Protein sequence
MLDREGFRPN VGIILLNAHN EVFWGKRLRE HSWQFPQGGI KYGETPVQAM YRELHEETGL 
LPEHVKVIGR TRDWLRYEVP DKFIKREVRG HYRGQKQIWF LLRMVGRDCD ICLRATDHPE
FDAWRWNEYW VPLDCVIEFK RDVYQLALTE LSRFMRRAAP RAEKPGGHHG PRYPRIASSM
ESPPDSTVMT VTSVTTVSIE TSVHVTIASD CGPGSASTAE VDAAPDHEDE SAGETAGSLF
RPGVRN