| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3443 |
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| Symbol | |
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| ID | 6284252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3874664 |
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| End bp | 3876400 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623016 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001897057 |
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| Protein GI | 187925415 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0201735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00179562 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGCTT CCCGTTTCTT TATCGGTACC CTCAAAGAAG CTCCCGCCGA CGCAGAGATC
GTCAGCCACA AGCTCATGGT GCGCGCCGGC ATGATCCGCC GCGTTGCCGG CGGTATCTAT
AACTACCTGC CGGTCGGCCT GCGCTCGATC CGCAAGGTGG AAGCCATCGT GCGCGAAGAA
ATGAACCGGG CAGGCGGTAT TGAATTGCTG ATGCCGGCAG TGCAGCCGGC CGAGTTGTGG
CAGGAATCGG GCCGTTGGGA AAAGTACGGT CCCGAACTGC TGCGCTTCAA GGATCGCAGG
CAGTCCGATT TCGTGATCGG ACCGACCCAC GAAGAAGTGG TCACGGATAT CGCGCGCAAT
CAGATCAAGA GCTATCGCCA GCTGCCGGTG AACTTCTACC AGATCCAGAC CAAGTTCCGC
GACGAGATCC GTCCGCGTTT CGGCGTGATG CGCGGCCGCG AATTCATCAT GAAAGACGCG
TACTCGTTCG ACAAGGACAT GGACGGTCTG CGCGAGTCGT ATCGCAAGAT GTACGACGCG
TACGTGCGCA TTTTCACGCG CCTCGGTCTG GACTTCCGCG CGGTGGCGGC GGACAACGGG
TCGATTGGCG GCAGCGGTTC GCACGAATTC CACGTGATCG CCGAGACCGG TGAAGATGCG
ATCGCCTACT GCCCGACCTC GGATTTCGCG GCGAACGTCG AAGCGGCCGA AGCGCTGCCG
CTCTACGCGG AACGCGCGGC GCCCACCGAA GAAATGAAGA AGACTCCCAC GCCGGGCAAG
GCGAAGTGCG AAGCGGTGGC CGAGCTGCTG AACATTCCGC TCGAGCGCAC GATCAAGTCG
ATCATCCTCG CCACCGAAAA TGAAGGCGCC GAGCCGACCA TCTGGTTGCT GATGCTGCGC
GGCGACCACG ATCTGAACGA GATCAAGGCG AGCAAGCTGC CGGGTCTGGC CGAGTTCCGC
ATGGCGACCG AGGCTGAAAT CATTGAAACC TTCGGTACGC CGCCGGGTTA CCTCGGCCCG
ATCGGCACGA AGAAGCCGAT CAAGGTCGTC GCGGATCGCA CGGTCGCGAA CATGAGCGAC
TTCGTGGTCG GCTCGAACGA AGTGGATTAC CACACCACGG GCGTGAACTG GGGGCGTGAT
CTGCCGGAGC CTGTCGTCGC CGACATTCGC AACGTGAAGA AGGGCGATCC GTCGCCGGAC
GGCAAGGGCG TGCTCGACAT CTGCCGCGGT ATCGAAGTGG GCCACGTGTT CCAGCTCGGC
ACCAAGTATT CCGAAGCCAT GGGCGCGACC TGCCTCGACG AAACCGGTAA GCCGCGTCCG
ATGGAAATGG GCTGCTACGG GATCGGCGTG ACGCGTATCC TGGGCGCCGC GATCGAACAG
AATTTCGACG ACAAAGGCAT CATCTGGCCG GAATCGATCG CGCCGTTCGA AGTCGTGCTG
TGCCCGATGG GCTACGACCG CAGCGAAGCC GTGCGCGCGG AAGCCGACAA GCTTTACGCG
GCGCTGGTCG AAGCGGGTAT CGACGTGATC CTCGACGACC GCGGCGAGCG CCCGGGCGTG
ATGTTCGCCG ACTGGGAGCT GATCGGCGTG CCGCATCGTC TCGTGATCGG CGACCGTGGC
CTGAAGGAAG GCAAGCTCGA ATACCAGGGC CGCCGCGACG CTGAAGCGAC GCTGCTGCCG
GTCGAAGACG CCGCGCAAAC GGTGATCGGG AAAGTTCGCG CAGCGTTGGC GCGTTAA
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| Protein sequence | MKASRFFIGT LKEAPADAEI VSHKLMVRAG MIRRVAGGIY NYLPVGLRSI RKVEAIVREE
MNRAGGIELL MPAVQPAELW QESGRWEKYG PELLRFKDRR QSDFVIGPTH EEVVTDIARN
QIKSYRQLPV NFYQIQTKFR DEIRPRFGVM RGREFIMKDA YSFDKDMDGL RESYRKMYDA
YVRIFTRLGL DFRAVAADNG SIGGSGSHEF HVIAETGEDA IAYCPTSDFA ANVEAAEALP
LYAERAAPTE EMKKTPTPGK AKCEAVAELL NIPLERTIKS IILATENEGA EPTIWLLMLR
GDHDLNEIKA SKLPGLAEFR MATEAEIIET FGTPPGYLGP IGTKKPIKVV ADRTVANMSD
FVVGSNEVDY HTTGVNWGRD LPEPVVADIR NVKKGDPSPD GKGVLDICRG IEVGHVFQLG
TKYSEAMGAT CLDETGKPRP MEMGCYGIGV TRILGAAIEQ NFDDKGIIWP ESIAPFEVVL
CPMGYDRSEA VRAEADKLYA ALVEAGIDVI LDDRGERPGV MFADWELIGV PHRLVIGDRG
LKEGKLEYQG RRDAEATLLP VEDAAQTVIG KVRAALAR
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