| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3440 |
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| Symbol | |
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| ID | 6284249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3871791 |
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| End bp | 3873158 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623013 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001897054 |
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| Protein GI | 187925412 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000127392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000711681 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGACA ATCTGACTCA ACGGATGGCG CGCGTCGTCA AGACGCTGCG CGGCGAAGCC
CGGCTCACCG AGGCGAACAC CCAGGAAATG CTGCGCGAGG TGCGTCTCGC GCTGCTCGAG
GCCGACGTGG CGCTGCCCGT CGTGCGCGAG TTCATTGCCA AGGTGAAGGA AAAGGCGCTC
GGCGAAGAAG TCATCAGCAG CCTCTCGCCG GGCCAGGCGC TCGTCGGCGT GGTGCAGCGC
GAGTTGACCG CGATCATCGG CGGCGACTAT GAGGGCAAGG CGGTCGAACT CAACCTCGCC
GTCACGCCGC CGGCGGTGAT CCTGATGGCG GGTCTGCAGG GCGCGGGTAA GACGACCACC
GTCGGCAAGC TCGCCAAACT GCTGCGCGAG AAGTACAAGA AAAAAGTACT GACTGTGTCG
TGCGACGTTT ACCGGCCTGC CGCTATCGCG CAGTTGAAGA CGGTGACCGA GCAGGTCGGC
GCGGATTTCT TCCCGTCGGA ACCGGATCAG AAACCGGTCG ACATCGCGCG CGCCGCCGTG
GATTGGGCCA AGCGCCACTA TCACGACGTG CTGCTGGTCG ACACGGCCGG CCGTCTCGGT
ATCGACGAAG CGATGATGCA GGAAATCACC GCGCTGCATA ACACTCTCAA GCCGGCGGAA
ACGCTGTTCG TGGTCGACGC GATGCTCGGT CAGGACGCGG TTAACACCGC CAAGGCGTTT
AGCGATGCGC TGCCGCTCAC CGGCGTGGTC CTCACCAAGC TCGACGGCGA TTCGCGCGGT
GGCGCGGCGC TCTCCGTGCG TCACGTCACC GGCAAGCCGA TCAAGTTCGT CGGCGTCGCG
GAAAAGCTCG ACGGCCTCGA AGTCTTCTAC CCGGATCGCA TGGCGAACCG GATTCTCGGC
ATGGGTGACA TTCTCGCCCT CGTCGAAGAA GCGCAACGCG GCGTGGACGT GCAGGCCGCG
CAGAAGCTCG CCGACAAGGT CAAGAAGGGC GGCGACTTCG ATCTGAACGA TTTCCGCGCG
CAGCTCACGC AAATGAAGGG CATGGGCGGC CTGTCGTCGC TGATGGACAA ACTGCCCGCG
CAGTTCCAGC AAGCCGCCGC GGGCGCCAAC ATGGGCCAGG CCGAGAAGCA GATGCGCCGC
ATGGAAGGCA TCATCAATTC CATGACGCCG CAGGAGCGCG CCAAGCCGGA TCTGATCAAG
GCCACGCGCA AGCGCCGTAT TGCCGCCGGC GCGGGCGTGC AGGTGCAGGA AGTCAACCGC
ATGCTGAACC AGTACGACCA GATGCGCACC ATGATGAAAA AGCTCAAAGG CGGCAATCTG
CAAAAGATGA TGCGCGGCAT GAAGGGCATG TTGCCCGGCA TGCGCTAA
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| Protein sequence | MLDNLTQRMA RVVKTLRGEA RLTEANTQEM LREVRLALLE ADVALPVVRE FIAKVKEKAL
GEEVISSLSP GQALVGVVQR ELTAIIGGDY EGKAVELNLA VTPPAVILMA GLQGAGKTTT
VGKLAKLLRE KYKKKVLTVS CDVYRPAAIA QLKTVTEQVG ADFFPSEPDQ KPVDIARAAV
DWAKRHYHDV LLVDTAGRLG IDEAMMQEIT ALHNTLKPAE TLFVVDAMLG QDAVNTAKAF
SDALPLTGVV LTKLDGDSRG GAALSVRHVT GKPIKFVGVA EKLDGLEVFY PDRMANRILG
MGDILALVEE AQRGVDVQAA QKLADKVKKG GDFDLNDFRA QLTQMKGMGG LSSLMDKLPA
QFQQAAAGAN MGQAEKQMRR MEGIINSMTP QERAKPDLIK ATRKRRIAAG AGVQVQEVNR
MLNQYDQMRT MMKKLKGGNL QKMMRGMKGM LPGMR
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