Gene Bphyt_3429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3429 
Symbol 
ID6281845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3859543 
End bp3860943 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content68% 
IMG OID642623002 
ProductMJ0042 family finger-like protein 
Protein accessionYP_001897043 
Protein GI187925401 
COG category 
COG ID 
TIGRFAM ID[TIGR02098] MJ0042 family finger-like domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0286835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTGG CGACGCGTTG CCCCTTCTGC GAAACCGTCT TTCGTCTGCA AACGGAACAG 
CTTGCGCTGC GCCGCGGCCT CGTGCGCTGC GGACATTGCC ATGAAGTATT CGATGCATCG
AGCAGCCTGT TCGACATCAG CGAAGGCGGT GATTTTTCCA CCGCGAAACC GGTCGCCGCG
GCTGCGGCGA TAGAAGCGCT CTCGGGCGTG CGGCCGAAAG GCCCCGACTT CAGCGCCGAA
GCCTGGGACC CGTGGGCGGC CGCGCCCGAC GCCGCCATCG ACAACCGTCT GCGCCACAAC
GCCGGCAATG TGCCGCTCTC GCCGGTCTCG ACCGGCGCGG GCGTCGCCGT CACGCCGCAC
CATGCCGCGG AGCCTGAGTT GCCGCCCGGC GCACCCAACG CAGCGCTTCC TCCCGACGAT
GAACCACTGC TCGCGGATGC GCCGCTCGAC CCGTTCGCAT ATCACCTGGA CCCGCCCGAG
GAAGATACCG AAGCGCCGCG TGTCTGGCAC AAGACTGAGC GGGCTCCCGA CGCGGTGCCA
AGCGAACCGC TCGAAGAGCC GGTTCTGGAC GAGCCGGCTA CCTTGTATGG CATTCCTGAA
AATGAGCCGC GTTTCGGCGC GGCCGGCTTG GGTGCGGCCG GCTTGGGTGC GGCCGGCTTG
GGTGCGGCCG GCTTAGGCGC GGCCGGTGCA GGTGCAGGTG CAGGTGCAGG TGCAGGTGCG
CCTGGCGTAG GCTCCGCCAA CCCACGTGCA GCGGGCGCAA CTGGCGCGGC TTCAGGCGCA
GCCGCGACGC CCTTTGCCCC TGCCAGCCCC GCTGCCGCCG GCCCAATCTC CGCCAGCGGC
GAACCCTTTT CCGTGCAGCC CGTCAACGAC GGCCCCGATC CTTTCCCCGT GGTGCGCGAA
ACTCGCCCGG CCGAACCGCG GCGCATGGGC TGGATCATCG CCGGCTCGGT GGTGGCGGCG
CTGTTGATCA TCGCGCTGCT TGCGCAGCTC GCCTGGTGGC AGCGCGAAAC GGTGATGGTG
TATTTCCCGC GCTCGCAGAC GCTCTATGCG AAAGCCTGCC TGACGCTCGG CTGCCAGGTC
ACGCCGCCGC ACGACATCGA CGGCTTGCAG GTCGAACCGT CCGATCTGCG GCAGATCGAC
GGTCCGCACA AGCTCGAACT GAAGATGCCG CTGCGCAATC GCTTCAATAT CGCGCTCGCC
TATCCGGCCA TCGAACTCAC GCTGCTCGAC GACCAGAACA ACGTCGCGGT GCGCCGCGTG
CTGTGGCCGC AAGACTACGT TCCGCCCGGC ACGCAGATCG CGGCCGGCCT GCCCGCGCAT
ACGACCCAGA CCATGATCGT GCATCTCGAC ACGGGCAATG CGGTCGCTTC CAATTTCCGC
GTACAGATTT TTTATCCGTA A
 
Protein sequence
MLLATRCPFC ETVFRLQTEQ LALRRGLVRC GHCHEVFDAS SSLFDISEGG DFSTAKPVAA 
AAAIEALSGV RPKGPDFSAE AWDPWAAAPD AAIDNRLRHN AGNVPLSPVS TGAGVAVTPH
HAAEPELPPG APNAALPPDD EPLLADAPLD PFAYHLDPPE EDTEAPRVWH KTERAPDAVP
SEPLEEPVLD EPATLYGIPE NEPRFGAAGL GAAGLGAAGL GAAGLGAAGA GAGAGAGAGA
PGVGSANPRA AGATGAASGA AATPFAPASP AAAGPISASG EPFSVQPVND GPDPFPVVRE
TRPAEPRRMG WIIAGSVVAA LLIIALLAQL AWWQRETVMV YFPRSQTLYA KACLTLGCQV
TPPHDIDGLQ VEPSDLRQID GPHKLELKMP LRNRFNIALA YPAIELTLLD DQNNVAVRRV
LWPQDYVPPG TQIAAGLPAH TTQTMIVHLD TGNAVASNFR VQIFYP