| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3420 |
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| Symbol | |
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| ID | 6282362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3850091 |
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| End bp | 3852208 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622993 |
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| Product | ribonuclease II |
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| Protein accession | YP_001897034 |
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| Protein GI | 187925392 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.108028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGTTT TCTTCGAGGA ATCGGGCAGT TTCAAGGCCG GCAGCGTGCT GTCGCGCCAG
GGCGATGCTT TTCAGGTCGA GCTGCCGGGC GGCCGGCGCG CCAAGGTGCG CGCGAAAGAC
GTGCTGATCG AATTCGAAAA GCCGAGCGCG GCCGAACTGA TGCAACAGGC CGACGCCGCC
GCGCAGGAGA TCGATCTGGA CTTCCTGTGG GAGTGCGCGC CTGACGACGA ATTTCCGTTC
GCGACCCTCG GCGCCGAATA TTTCGGCGAA AGCTTCGGGT CGATCGAGCG CGCCGCGCTG
GTGTTGCGCA TGCATGGCTC GCCGGTGTAC TTCCGCCGCA AGGGCCGCGG CATGTATCAG
CGCGCGCCGC AGGAACAACT GAAGATGGCG CTCGCCGGCC TCGAGCGCAA ACGCCAGCAG
GCGCTGGTGC AGGCAGGATA CGAAGACGAG CTGAAAGCCG GCCGTCTGCC GGAAGCTTTC
ACCGGCAGCA AGGCGCTGGG GCTGTTGACC AAGCCGGACA AGAACACGAT CGAGTACAAG
GCGCTCGAAG CCGCGGCGGC GGCGCGCGGT ATTTCGCAAG CGCGTCTGAT GCTGGAAAAC
GGTGCCATTC CGTCGGCGCG TGCGCTGCAC GAAGCGAAAT TCCTCTCCGA GTTTTTCCCG
CACGGCACGG GCTTTCCGCC TGTCACCGTC GGCAGCTTGC CGGAGGATCT GCCCGAAGCG
AACGTGCAGG CGTTTTCGAT CGACGACATC ACCACGACTG AAATCGACGA TGCTTTCTCC
GTCGAGCATC TGGCCGATGG CCGCGTGCGG ATCGGCGTGC ACATCGCCGC GCCGGCGCTC
GGCATTCAGC GGGGCGACGA GGTCGATGCG ATCGCGCGCA CGCGTCTGTC GACCGTGTAT
ATGCCGGGCG ACAAAATCAC CATGCTGCCC GACAGCGTTG TCGAAGCGTT CACGCTGGCC
GAAGGCGGCT TGCGTCCGGC GCTCTCGCTG TATGTGATCG TCAATCGCGA GACGCAGGAG
ATCGTTGCGA GCGAAACGCG CGCCGAGCGC GTGTTCGTGA AGAACAACCT GCGCCACAAC
ACACTCGACG AGTTGGTCAC CGAAGAGGCG CTCGCCGCCG GCAGCGGCGA CTATCCGCAC
AAGGACGATA TCGCCGTGCT GTGGCCGTTC GCGCAGGCGC TGTTCGAAAA GCGCCAGGCC
GCGCGCGCCG GCTACGGTTT GCGTCGCGAA GTGCAGCGCA ACACCGACTT CAACTTCTAC
GTGGAAGGCG AGCACATCAC GATCACGCCG CGCCGTCGTG GGTCGCCGCT CGATACGATC
GTCGCCGAAC TGGCGATTCT CGCGAACTCA TCGTGGGGCG CGTTCCTGCA TGACCACGGC
GTGCCGGGCA TTTACCGCAC GCAACGCGCA TTCGGCGCGC CAACCGGCCC GAAGCGCACG
CGCATGCAGA CCAACGCCGC GCCGCACGAA GGCCTCGGCG TCACGCAATA CGCGTGGAGC
ACATCGCCGC TGCGCCGTTA CGTCGACCTG GTGAACCAGT GGCAGTTGAT TGCCTGCGTG
CAGCATGGCG TGACCGCGAA ACTGGCTGCG CCGTTCAAGC CCAAAGACGC CGATCTGTTC
GCCGTCGTGC AGGGTTTCGA CGATACGTAC ACCGCGTATG CCGATCATCA GCGTCGCATG
GAATATTTCT GGTGCCTGCG CTGGCTGAAG CAGGAGAACA GGAAGCAGGT CGTGGCGTCG
GTGGTGAAGG GCGATCTGGT GCGTCTTGAA GAGATTCCGC TGCTTCTGCA TGTGCCGGGC
CTCGGCGTGC ACGCGCGCGG CACGCGTTTG CAGATGGAAG TGATGTCGAT CGATGAGTTG
ACCGTCGAAG CGTCCGTGCG TCTGCTGCAC GTGCTCGACG CGCCGACGGT GACGAGCGGC
AGCGAGGCTG AAGAAGCGGA CGAGGGCGAA GAGGAGATCA TCGACGCCGC GGACGAGAGC
GCCGAAGGCG AAGCCGAGGC GCAGGCCAAA GCCGAACTCG ACGGCAACGA CGCGGCTGCC
GTGAAGGACG ACGCCGAAAG CAGCGAGGGT GCGGACGGTG CCGCTACGCA TCAGCACATT
GCGGAGCCGG GACGATGA
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| Protein sequence | MNVFFEESGS FKAGSVLSRQ GDAFQVELPG GRRAKVRAKD VLIEFEKPSA AELMQQADAA
AQEIDLDFLW ECAPDDEFPF ATLGAEYFGE SFGSIERAAL VLRMHGSPVY FRRKGRGMYQ
RAPQEQLKMA LAGLERKRQQ ALVQAGYEDE LKAGRLPEAF TGSKALGLLT KPDKNTIEYK
ALEAAAAARG ISQARLMLEN GAIPSARALH EAKFLSEFFP HGTGFPPVTV GSLPEDLPEA
NVQAFSIDDI TTTEIDDAFS VEHLADGRVR IGVHIAAPAL GIQRGDEVDA IARTRLSTVY
MPGDKITMLP DSVVEAFTLA EGGLRPALSL YVIVNRETQE IVASETRAER VFVKNNLRHN
TLDELVTEEA LAAGSGDYPH KDDIAVLWPF AQALFEKRQA ARAGYGLRRE VQRNTDFNFY
VEGEHITITP RRRGSPLDTI VAELAILANS SWGAFLHDHG VPGIYRTQRA FGAPTGPKRT
RMQTNAAPHE GLGVTQYAWS TSPLRRYVDL VNQWQLIACV QHGVTAKLAA PFKPKDADLF
AVVQGFDDTY TAYADHQRRM EYFWCLRWLK QENRKQVVAS VVKGDLVRLE EIPLLLHVPG
LGVHARGTRL QMEVMSIDEL TVEASVRLLH VLDAPTVTSG SEAEEADEGE EEIIDAADES
AEGEAEAQAK AELDGNDAAA VKDDAESSEG ADGAATHQHI AEPGR
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