| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3400 |
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| Symbol | |
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| ID | 6282728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3830779 |
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| End bp | 3831777 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642622973 |
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| Product | thiamine monophosphate kinase |
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| Protein accession | YP_001897014 |
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| Protein GI | 187925372 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0357932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTCCG AGTTTTCGCT GATCGATCGT TTCTTTGCCC GCCGCGCCGC TGCCCGGCCA
TCCGATGCAG CCGCCGGTAC GCTCGGCATC GGCGACGACT GCGCACTGCT CGCGCCGCGC
GCCGGCGAAA TGCTGGCGAT TTCGACGGAC ATGCTGGTCG AAGGCCGCCA CTTTTTCGCC
GATGTCGATC CCGAGGCGCT GGGTCACAAA GCGCTAGCGG TGAATCTGTC GGACCTCGCC
GCAATGGGCG CGCAACCGCA GGCGTTCACG CTGGCGTTTT CCCTGCCGAA GGCAGAAGAA
GCTTGGCTCG CCGCGTTCAG CGAAGGGCTG TTCGCGCTGG CCGAACGCTA CGGTTGCGAG
CTGATCGGCG GCGATACGAC TGGCGGCCCG CTCAATCTGT GCATCACGGT GTTTGGCAGC
GTCCCACCGC AAGCGGCGCT GCGCCGCGAC GCCGCGCAAC CGGGCGACGA CATCTGGATT
TCCGGCACGC TCGGCGACGC CCGCGCCGGT CTCGGCGTGC AGCGCGGCGA ATGGACCGCC
GATGCCAGCG ACACTGCGAC GTTTCGTCGC GCCCTCGAAC GCCCGGAGCC GCGGGTCGCG
CTCGGCTTGG CCCTACGCGG CATCGCCCAC GCGGCGCTCG ACCTCTCGGA CGGCCTTGCC
GGCGATCTGC TGCACATTCT GGAACGCTCG AAGCTGCGGG CCACGGTCGA CGTCGACGAC
GTCCCGCGTT CCGCCGCGCT GCGCCGCCTC GCACCCGAAA TCCAGCGACG CTGCACGCTC
GCCGGCGGCG ACGATTACGA ACTCTGCTTC ACCGCGCCAG TCGCGGCGCG TGCCGAAGTC
GAAAAGGCCG GCCACGAGGT GGGCATCCAG CTCACCCGCA TCGGTACAAT AAGCGCTCTC
GAAACGGCGG CCGACCGCCC GGCGATCGGC TGGCGCGATG CCTCCGGCGC GCCGCTCTCC
CTGACGTTGC AAGGCTTCGA CCACTTTCAT GCAGACTGA
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| Protein sequence | MLSEFSLIDR FFARRAAARP SDAAAGTLGI GDDCALLAPR AGEMLAISTD MLVEGRHFFA
DVDPEALGHK ALAVNLSDLA AMGAQPQAFT LAFSLPKAEE AWLAAFSEGL FALAERYGCE
LIGGDTTGGP LNLCITVFGS VPPQAALRRD AAQPGDDIWI SGTLGDARAG LGVQRGEWTA
DASDTATFRR ALERPEPRVA LGLALRGIAH AALDLSDGLA GDLLHILERS KLRATVDVDD
VPRSAALRRL APEIQRRCTL AGGDDYELCF TAPVAARAEV EKAGHEVGIQ LTRIGTISAL
ETAADRPAIG WRDASGAPLS LTLQGFDHFH AD
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