| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3378 |
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| Symbol | holA |
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| ID | 6281623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3807314 |
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| End bp | 3808432 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642622952 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_001896993 |
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| Protein GI | 187925351 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.930897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000672182 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACTGC GACTTGACGC GCTTGAAGCG CATTTCGCCA AAGGACTCGC CGGACTGTAC
GTCGTGTACG GCGACGAGCA CCTGCTCGCG CAGGAAGCGT GCGACCGCAT TCGCGCCACG
GCGCGCGCGG CCGGCTTTAC CGATCGTTCG GTGTTCACGG TGGAGCGCGG TTTCGACTGG
AGTTCGCTGC TGGGCGCGAG CCAGTCGATG TCGCTGTTCG GCGACCGGCA ACTGGTCGAG
CTGCGCATTC CATCAGGCAA GCCCGGCAAG GAAGGCGCGG ACGCGCTGAA AGCGCTCGCG
GCTGCCGTCA ACGACGACGT GCTCACCATG ATCACGCTGC CGCGGCTCGA CGTGGCCACG
CAGAAGTCGG CGTGGTTTAC GGCTTTGTCC GATGCGGGCG TCGCGTTGAA GATCGATCCG
GTCGAGCGCG CGCAGTTGCC GAATTGGGTT GGGCAGCGGC TCGCCGCGCA AGGCCAGCGA
GTCGCCGCAG GCGAAGAAGG GCGGCGCGCG CTGGCGTTCA TCGCCGAGCG CGTGGAAGGC
AATCTGCTCG CCGCGCATCA GGAAATCCAG AAGCTCGGGC TGCTGTATCC GGCGGGTTCG
TTGAGCTTCG AACAGGTTCA GGACGCCGTG CTCAACGTCG CCCGTTACGA TGTTTTCAAG
CTGAACGAAG CGATGCTGGC GGGCGATGTA GGCCGCTTGT CGCGCATGCT CGACGGCTTG
CGTGGCGAAG GCGAGGCCGC GGTGCTGGTG CTATGGGCCG TGGTCGAAGA AGTGCGCACG
CTGCTGCGGA TCAAGCGCGG CGTAGCGGCC GGCAAGGCGC TTGCAATGCT GGTGCGCGAG
AACCGCGTGT GGGGTCCGCG TGAGCGGCTG ATCGGCCCGG CCTTGTCGCG CGTGAGCGAA
GGCGCGCTGG AAAAGGCGCT CGCGCTGGCG GCGCGGCTCG ATCGTCAGGT GAAGGGGTTG
TCGGGCGGAA CGCCGGGCAA TCATCGCAAC GATCCTCCGC CTGATCCGTG GGACGGTCTG
TTTGAACTCG CCATGACGGT GGCTTCGCCG AAGACGGCGC CCGTGCCGCC GCCACGACCT
CGAAGCTTGA CAGCTGCGCC GGCGCGAAGG CCTGTCTGA
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| Protein sequence | MQLRLDALEA HFAKGLAGLY VVYGDEHLLA QEACDRIRAT ARAAGFTDRS VFTVERGFDW
SSLLGASQSM SLFGDRQLVE LRIPSGKPGK EGADALKALA AAVNDDVLTM ITLPRLDVAT
QKSAWFTALS DAGVALKIDP VERAQLPNWV GQRLAAQGQR VAAGEEGRRA LAFIAERVEG
NLLAAHQEIQ KLGLLYPAGS LSFEQVQDAV LNVARYDVFK LNEAMLAGDV GRLSRMLDGL
RGEGEAAVLV LWAVVEEVRT LLRIKRGVAA GKALAMLVRE NRVWGPRERL IGPALSRVSE
GALEKALALA ARLDRQVKGL SGGTPGNHRN DPPPDPWDGL FELAMTVASP KTAPVPPPRP
RSLTAAPARR PV
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