| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3371 |
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| Symbol | |
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| ID | 6284308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3790581 |
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| End bp | 3791426 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622945 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_001896986 |
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| Protein GI | 187925344 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0964604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000707391 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCTGT CCCAGGTGGA AGAGATGCGC GAGCAGTTGC GGCCCTCCGA GCGCAAACTC
GCCGACTACG TGATCGAGGC GCCACGCGAG GTGCTCGATC TGTCGATGAC GGAAGTGGCC
GCGCGCGCAG GCGTGAGTCA GCCAACCATC GCGCGGTTCT GTCATGCGCT CGGGTTTTCG
GGGTTTCGCG AGTTCAAGAT ACGGCTGGCG CAGGGGATTG CGTCGGGCGT GCCGACCGTC
TATCGGGATG TGCGGCCGGA TGAAGGCGCG CCCGGACTGA TTGCCAAAGT GTTCGATCGA
ACCATCGGCA CGCTGATCGA GGTGCGCAAC AGCCTGTCGC CGGATAGCGT GGAAGCGGCC
GTTGAGTTGC TAGCGAACGC GGCGCGTATC GAATTCTATG GAGCGGGCGG ATCGGGCATC
GCCGCGCAGG ATATCCAGCA CAAGTTTTTT CGGCTCGGCA TGCCGAGCGT CGCGTACTCC
GATCCGCATA CTTACTCGAT GTCGGCGGCG CTGCTGGGGC CTGGCGATGT CGTGGTCACG
GTGTCCAACA CGGGTCGAAC CCGCGACATC ATCGAAGCGG CGCGCTCGGC GCTCGCTCGC
GGCGCGAAAG TGATCGCGAT CACGCATGGC AGTTCGCCGC TTGCGCGTGT CGCGTCGATT
TGCCTGTTCT CGAACGTGGT CGAGGAAAAC GACGTGTTTT CGCCGATGAC ATCGCGCATG
TCGCATCTGG CGATCGGCGA TATTCTCGCG GTGGGCGTCG CGCTCAAGCG TGGGCCTGAG
TTGGTGGAGC GGGTTGGGCA GGCGAAAGGG GTGATCGGCC GGTTGAGGAT TGACGGCGAA
GGTTGA
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| Protein sequence | MMLSQVEEMR EQLRPSERKL ADYVIEAPRE VLDLSMTEVA ARAGVSQPTI ARFCHALGFS
GFREFKIRLA QGIASGVPTV YRDVRPDEGA PGLIAKVFDR TIGTLIEVRN SLSPDSVEAA
VELLANAARI EFYGAGGSGI AAQDIQHKFF RLGMPSVAYS DPHTYSMSAA LLGPGDVVVT
VSNTGRTRDI IEAARSALAR GAKVIAITHG SSPLARVASI CLFSNVVEEN DVFSPMTSRM
SHLAIGDILA VGVALKRGPE LVERVGQAKG VIGRLRIDGE G
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