Gene Bphyt_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3369 
Symbol 
ID6281312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3787713 
End bp3788354 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID642622943 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_001896984 
Protein GI187925342 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.340421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000181744 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTCGA AAACAGTAAG CGATATCGTG CGCCTCGGCC CGGTGATTCC GGTGCTCGCG 
TTCGATTCGG TCGAGCAGGG TGAGAACGTG TCGCGAGCGC TGCATGCGGG CGGCGTGAAG
GTGCTGGAAA TTACTTTGCG CACCGCAGCA GGCCTCGAAG CGATCGAACG TGCGAGCCAG
TTGGCCGAAG ATATCGTGGT CGGTGTCGGC ACGATTACGA AGCCCGAGCA CTGCGCTCAG
GCCAAGAAGG CGGGCGCGCA GTTCGGCGTC TCCCCTGGCT TGACGAGAGA CATGCACAAG
GCCGCGCAGG ATGCGGGCTT GCCGCTGTTG CCGGGTGTGA TGACGCCGAC GGACATCATC
ACGGCGCTGG AACTCGGCTA TGAGATCGTG AAGTTTTTCC CGGCGCAGCA AGCCGGTGGC
GTGCCGATGC TGCAAGCATT CCACGGCCCG TTCCCGAATC TGAAGTTCTG CCCGACCGGC
GGCATCACGG CGGAAACGGC GACGCATTTC CTGTCGCTGC CGAACGTGGT GTGCGTGGGC
GGCTCGTGGC TCACGCCGAA AGCCGCGCTC GCCGCGCAAA ACTGGGACGA GGTCACGCGT
CTGGCGCGTG CCGCGAGCCA GTTGGCGGCA CCGGCTCACT AA
 
Protein sequence
MTSKTVSDIV RLGPVIPVLA FDSVEQGENV SRALHAGGVK VLEITLRTAA GLEAIERASQ 
LAEDIVVGVG TITKPEHCAQ AKKAGAQFGV SPGLTRDMHK AAQDAGLPLL PGVMTPTDII
TALELGYEIV KFFPAQQAGG VPMLQAFHGP FPNLKFCPTG GITAETATHF LSLPNVVCVG
GSWLTPKAAL AAQNWDEVTR LARAASQLAA PAH