Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3369 |
Symbol | |
ID | 6281312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3787713 |
End bp | 3788354 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642622943 |
Product | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase |
Protein accession | YP_001896984 |
Protein GI | 187925342 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.340421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000000181744 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTCGA AAACAGTAAG CGATATCGTG CGCCTCGGCC CGGTGATTCC GGTGCTCGCG TTCGATTCGG TCGAGCAGGG TGAGAACGTG TCGCGAGCGC TGCATGCGGG CGGCGTGAAG GTGCTGGAAA TTACTTTGCG CACCGCAGCA GGCCTCGAAG CGATCGAACG TGCGAGCCAG TTGGCCGAAG ATATCGTGGT CGGTGTCGGC ACGATTACGA AGCCCGAGCA CTGCGCTCAG GCCAAGAAGG CGGGCGCGCA GTTCGGCGTC TCCCCTGGCT TGACGAGAGA CATGCACAAG GCCGCGCAGG ATGCGGGCTT GCCGCTGTTG CCGGGTGTGA TGACGCCGAC GGACATCATC ACGGCGCTGG AACTCGGCTA TGAGATCGTG AAGTTTTTCC CGGCGCAGCA AGCCGGTGGC GTGCCGATGC TGCAAGCATT CCACGGCCCG TTCCCGAATC TGAAGTTCTG CCCGACCGGC GGCATCACGG CGGAAACGGC GACGCATTTC CTGTCGCTGC CGAACGTGGT GTGCGTGGGC GGCTCGTGGC TCACGCCGAA AGCCGCGCTC GCCGCGCAAA ACTGGGACGA GGTCACGCGT CTGGCGCGTG CCGCGAGCCA GTTGGCGGCA CCGGCTCACT AA
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Protein sequence | MTSKTVSDIV RLGPVIPVLA FDSVEQGENV SRALHAGGVK VLEITLRTAA GLEAIERASQ LAEDIVVGVG TITKPEHCAQ AKKAGAQFGV SPGLTRDMHK AAQDAGLPLL PGVMTPTDII TALELGYEIV KFFPAQQAGG VPMLQAFHGP FPNLKFCPTG GITAETATHF LSLPNVVCVG GSWLTPKAAL AAQNWDEVTR LARAASQLAA PAH
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